Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03576 ATGAAAATGAAGTCCCTCTTATATCCGACCCTGTTGTCATTGCTGCATTGGCACGTGGCGGTGGTATCAGCTGCAAGGCTGAACATGGCTAGCGATGAATCGGCCTTGGTTGCCATGAGGGAGCATTTTAACTCCTTGGATCCCAACAATGTGCTCGCAAGCAACTGGTCTAGCACTACCTCTGTTTGCAACTGGATTGGCGTCACATGCGGCTCTTCCCACCGCAGAGTAACTGCCTTGAATCTCTCATACATGGCTCTTCATGCCACCATCCCTCCGCATCTTGGAAACCTGTCATTCCTTTCTCGCCTGCATCTTCCCAACAATAGCTTCCATGGTACTCTACCTGCTGATCTAGCTGGATTACGTAGACTGAGGATCATCAACCTCAGATTCAACAAATTCACAGGAAGCATCCCGTCCTGGTTTGAAACTCTACCCAAACTAGAATACCTGCTACTGACAGGGAACAGTTTCTCTGGCACAGTCCCACACTTTCTGTTCAACATGACTTCCCTGCAATATCTTGTACTTTCTGATAACCAGTTTTGGGGTCCCTTACCTTCCAACATTTTCTTGTCTCCTTCTTTGCAATATGTGTTTCTTACTCACAACCAAATTTCAGGAGCTATCCCTTCAGCTATCATCAACAGTTCGTTACTGCAGGTTATTGAACTCAACTACAACAACCTATCCGGACAACTGCCGGAGCGCATCTTCCACCATCTTCCAAACTTGAAAGGGCTTTACGTGACTAGTAATTCCTTATCCGGTGAACTTCCACGCAGTTTGTTCGATTGCAAGCAACTGCAATATTTATCCTTATCCTACAACACCTTCGGTGGAAACATACCATCTGCCATCGGGAATTTGACAAGCCTCAAAGAGATCTATCTTGGCTATAACAATTTCAGAGGTGCAATACCATATGAGTTTGGTAATCTACGTAGTTTAGAGATTCTGAGTCTTCCTTTCGCCAATGTGAGTGGCTACATTCCGCCATCAATCTATAATAGTTCTACCCTACAGGTAATTAGTATTACTGGAAATCATTTATCAGGCAGCCTGCCAGCAAGCCTAGGCTCCATGCTTCCAAAACTTGTTGGGCTGTACATGGGGATTAATTATCTCAGTGGAAGAATCCCAAGCTCCTTATGCAATGCCACTATGCTTAATACCATAGATTTGGCTTACAATTCATTTTCTGGATACATTCCAGACATTTTTGGCAGCTTAAGAAGTCTCCAGCTGCTCAATCTTGGTAAAAATAATTTGACAAGTGATTCATCCGATTCAGAGCTAAGCATTATAAATTCTTTGACAAATTGTAGATTTCTCAAAGAGTTGACATTTTCTCGAAATCCATTGGATTCCATTCTTCCAATATCGGTAGGAAACCTTTCTACTTCTCTGGTTGACTTGAATCTTCGGGGTTGTTCAATGAGAGGCACCATTCCAGCAAGTATTGGCAACTTGAGCAGCTTGATAAAACTTGACCTTGGTACTAATAATTTTGTTGGAACCTTTCCTACTAGCATAGGGAAATTAATAAAGCTACAAGGCTTCTATTTACATGACAACCAATTGGAAGGATTTGTTCCGAATCAATTGTGTCAATTAACGAGCTTGGATTCATTTGCCGTTAAAAGCAACAAGTTCTCTGGCCCTATACCTTCTTGCTTAGGGAATCTTACCTCATTGAGATGGCTTTGGCTTTCTTCAAATGAATTCAACTCAATACCTTCCACCTTGTGGGAGCTGTCCAATTTATTGCATTTAGACTTATCTTCCAATAATTTAAGTGGATATCTCCCATTAGAGAGTGGAAATCTAAAAGCCATAAGTTGGATTTATTTATCAGGAAATCAATTTTCAGGTAGCATCCCAAGAAGCCTCAGCAATCTTATGAATTTGGTTCTTCTTACCTTAGCAAGAAACAAATTTGAAGGGCCCATCCCAGAATCATTTGGTCGTATGGTAAGTTTGGAACAACTTGACTTATCAGAAAATATCTTGTCTGGTGTCATTCCTAAAACATTGGAGGCACTTGTGTATCTGAAATATTTCAATGTTTCTCACAATAAATTAAAAGGAAAAATCCCGGATGGGGGACCTTTTGCAAACTTCTCAGCTCAGTCGTTCATGGGGAATAAAGAATTATGTGGTGCTCCACGTTTCCATTTTTCGGAATGTAAAATTGAAAAATCCCGAAAATGGAATGCACATATTGTGTTGACATATGTTTTACCTGCAGCAATAGTTGTCACCCTTCTTGTGGCATTCCTTTGCATCCTAAAATTCCGGAAGCACAAGGTGGTCAACAATTCAGAGGTGAATCAATCAGGAGAAAGATGGAGAAGAATATCATACTATGAAATTCAGCAAGCAACAGATAGGTTCAATGATGGCAACTTGCTTGGTGTAGGGAGTTTTGGAAGAGTGTATAAAGGAGTACTCTCAGATGGGACGAATGTTGCAGTAAAAGTGTATAATCTGGGGCTAGAAGGAGCATTTAGGAGTTTTGACGCTGAATGTGAGATATTGCGCAGTGTCCGCCATCGAAACTTAACCAAAATCATTAGCAGCTGCAGCAACATGGACTTCAAGGCATTGATCCTAAGCTACATGCCTAATGGGAGTTTAGAGAGGTGGCTACACTCGGAACACCATAGCTTGAGTATGATCCAGAGGCTAAACATAATGATAGATGTTGCAGAAGCAATGGATTATCTGCACAATGGTGGTTCTGCACCAATTATACATTGTGATTTGAAACCGAGCAACATATTACTAGATGAAGACATGGTTGCCCATGTGGCTGATTTTGGCATTGCAAAATTGCTGAGTGGGGATGACTCCATCACTCAAACCATGAATCTAGCCACAATAGGCTATATGGCCCCTGAATATGGACTTGAGGGAACAGTGTCTAGACAAGGTGATGTGTATAGCTATGGAATTTTACTAATGGAGACCTTCACACAGAAAAAACCCACTGCTGAAATGTTTGTGGGAGAGTTTAGCATCAAAGAGTGGGTGAAAATGTCATGCCCTGATTCACTACTTGATATCATTGATGCAAAATTATTAGTGGAAGAAGGAGAGCCAAATACCACACAGGATTGCTTGTTGTCTATAATGACTCTAGCTCTGGATTGCTCAGCTGAGTCACCTGGGCTAAGGACAAATATAAAAAGTGTTGTGGTTGCGCTCAAGAAGATTAAAAGATTACTCTTGAACTAA 3243 0.4132 MKMKSLLYPTLLSLLHWHVAVVSAARLNMASDESALVAMREHFNSLDPNNVLASNWSSTTSVCNWIGVTCGSSHRRVTALNLSYMALHATIPPHLGNLSFLSRLHLPNNSFHGTLPADLAGLRRLRIINLRFNKFTGSIPSWFETLPKLEYLLLTGNSFSGTVPHFLFNMTSLQYLVLSDNQFWGPLPSNIFLSPSLQYVFLTHNQISGAIPSAIINSSLLQVIELNYNNLSGQLPERIFHHLPNLKGLYVTSNSLSGELPRSLFDCKQLQYLSLSYNTFGGNIPSAIGNLTSLKEIYLGYNNFRGAIPYEFGNLRSLEILSLPFANVSGYIPPSIYNSSTLQVISITGNHLSGSLPASLGSMLPKLVGLYMGINYLSGRIPSSLCNATMLNTIDLAYNSFSGYIPDIFGSLRSLQLLNLGKNNLTSDSSDSELSIINSLTNCRFLKELTFSRNPLDSILPISVGNLSTSLVDLNLRGCSMRGTIPASIGNLSSLIKLDLGTNNFVGTFPTSIGKLIKLQGFYLHDNQLEGFVPNQLCQLTSLDSFAVKSNKFSGPIPSCLGNLTSLRWLWLSSNEFNSIPSTLWELSNLLHLDLSSNNLSGYLPLESGNLKAISWIYLSGNQFSGSIPRSLSNLMNLVLLTLARNKFEGPIPESFGRMVSLEQLDLSENILSGVIPKTLEALVYLKYFNVSHNKLKGKIPDGGPFANFSAQSFMGNKELCGAPRFHFSECKIEKSRKWNAHIVLTYVLPAAIVVTLLVAFLCILKFRKHKVVNNSEVNQSGERWRRISYYEIQQATDRFNDGNLLGVGSFGRVYKGVLSDGTNVAVKVYNLGLEGAFRSFDAECEILRSVRHRNLTKIISSCSNMDFKALILSYMPNGSLERWLHSEHHSLSMIQRLNIMIDVAEAMDYLHNGGSAPIIHCDLKPSNILLDEDMVAHVADFGIAKLLSGDDSITQTMNLATIGYMAPEYGLEGTVSRQGDVYSYGILLMETFTQKKPTAEMFVGEFSIKEWVKMSCPDSLLDIIDAKLLVEEGEPNTTQDCLLSIMTLALDCSAESPGLRTNIKSVVVALKKIKRLLLN 1080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03576 1080 Gene3D Ribonuclease Inhibitor 31 141 IPR032675 -
Arst1g03576 1080 Gene3D Ribonuclease Inhibitor 142 188 IPR032675 -
Arst1g03576 1080 SUPERFAMILY Protein kinase-like (PK-like) 775 1071 IPR011009 -
Arst1g03576 1080 ProSiteProfiles Leucine-rich repeat profile. 566 588 IPR001611 GO:0005515
Arst1g03576 1080 SUPERFAMILY L domain-like 56 358 - -
Arst1g03576 1080 FunFam Serine-threonine protein kinase plant-type 780 875 - -
Arst1g03576 1080 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 364 1073 - -
Arst1g03576 1080 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 364 1073 - -
Arst1g03576 1080 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 443 735 - -
Arst1g03576 1080 ProSitePatterns Serine/Threonine protein kinases active-site signature. 919 931 IPR008271 GO:0004672|GO:0006468
Arst1g03576 1080 SMART serkin_6 800 1048 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g03576 1080 SUPERFAMILY RNI-like 345 700 - -
Arst1g03576 1080 SMART LRR_typ_2 122 145 IPR003591 -
Arst1g03576 1080 SMART LRR_typ_2 587 611 IPR003591 -
Arst1g03576 1080 SMART LRR_typ_2 659 682 IPR003591 -
Arst1g03576 1080 SMART LRR_typ_2 516 540 IPR003591 -
Arst1g03576 1080 SMART LRR_typ_2 564 586 IPR003591 -
Arst1g03576 1080 SMART LRR_typ_2 243 267 IPR003591 -
Arst1g03576 1080 SMART LRR_typ_2 170 194 IPR003591 -
Arst1g03576 1080 SMART LRR_typ_2 291 314 IPR003591 -
Arst1g03576 1080 SMART LRR_typ_2 219 242 IPR003591 -
Arst1g03576 1080 SMART LRR_typ_2 412 435 IPR003591 -
Arst1g03576 1080 Pfam Leucine rich repeat N-terminal domain 30 70 IPR013210 -
Arst1g03576 1080 Gene3D Transferase(Phosphotransferase) domain 1 876 1078 - -
Arst1g03576 1080 Pfam Protein kinase domain 801 1000 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g03576 1080 ProSiteProfiles Protein kinase domain profile. 800 1078 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g03576 1080 Gene3D Ribonuclease Inhibitor 431 740 IPR032675 -
Arst1g03576 1080 Gene3D Ribonuclease Inhibitor 189 430 IPR032675 -
Arst1g03576 1080 Gene3D Phosphorylase Kinase; domain 1 770 875 - -
Arst1g03576 1080 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 241 442 - -
Arst1g03576 1080 Pfam Leucine rich repeat 566 624 IPR001611 GO:0005515
Arst1g03576 1080 Pfam Leucine rich repeat 637 696 IPR001611 GO:0005515
Arst1g03576 1080 Pfam Leucine rich repeat 123 183 IPR001611 GO:0005515
Arst1g03576 1080 Pfam Leucine rich repeat 269 323 IPR001611 GO:0005515
Arst1g03576 1080 Pfam Leucine rich repeat 195 256 IPR001611 GO:0005515
Arst1g03576 1080 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 876 1080 - -
Arst1g03576 1080 ProSitePatterns Protein kinases ATP-binding region signature. 806 828 IPR017441 GO:0005524
Arst1g03576 1080 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 66 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03576 Arst-Chr1 97089401 97130309 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g03576 612 717 Receptor kinase-like Gene Family AT3G47570 34.579 1.00e-06 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Arst1g03576 Pkinase 1.9e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03576 - K13420 adu:107467292 2107.41