Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03574 ATGCAAGTCACTAAAGTTGCAAGGATGTTGGCAGCAAAGCCAACTGGAGTCGACGGGGAGCAGAAGTCGTGTACCATCATGGCTCTCTTGGATGGAGGAACATTGAGAAGACACAAGAGTTGGTTAAAGGCAGAGCCTCCAACAGTAGTGGTTGCAACAGTTGGGAGTTTATGCCAAATGCTTGAAAGACAAATTTTCTTGCTTGAATCTGTGCGGGTGCTAATTGTTGATGAGGTTGACTTCATTTTCAGTTCTTCAAAGCAAGTTAGTTCTCTTAGAAAGCTTTTGACTTCATATTCATCGTGCAATAACCGTCAGACAGTTTTTGCAAGTGCATCTATACCACAGCACAGACGATTTCTTCACGATTGTGTGCAGCAAAAATGGACAAAGAGTGATGTGATCCATATCCATGTCAGTCCAGTGGAGCCCATGCCATCTCGCCTGTGTCATAGATTTATAATATGCAATAACAAAAGGAAACTACAAACCCTATTATCCTTGATTCAATCTGATGCACCTGAGTCTGGCATTATATTTGTTGGTGAACAGTCTGAGAAGTCCAAAAAGGCTGGAAACGCTCCATCAACAGACCTTGTCATTGACTTTTTGAAGACATCATATGAAGGGCCTTTAGATATTGTCCTTCTCGAGGATGACATGAATTTCAACTCACGCGCAGTTTCATTGTTGGAGGTTCGAAAAGGAGGTGGATATCTGCTTGTAGCAACAGATATAGCTGCTAGAGGAGTTGACCTTCCTGAAATGTCTCATATCTACAACTTTGACTTGCCAAGGACTGCCATTGATTATCTTCATCGAGCAGGCAGGACTTGTAGGAAACCTTTTTCTGACATGAAATGTACTGTTACCACCATTACAGTTCCCGAGGAGAGGTTTGTTCTGCAGAAATATGAAAATGAGTTGATGTTTAACTCTGAGGAGCTTATTCCATAA 957 0.419 MQVTKVARMLAAKPTGVDGEQKSCTIMALLDGGTLRRHKSWLKAEPPTVVVATVGSLCQMLERQIFLLESVRVLIVDEVDFIFSSSKQVSSLRKLLTSYSSCNNRQTVFASASIPQHRRFLHDCVQQKWTKSDVIHIHVSPVEPMPSRLCHRFIICNNKRKLQTLLSLIQSDAPESGIIFVGEQSEKSKKAGNAPSTDLVIDFLKTSYEGPLDIVLLEDDMNFNSRAVSLLEVRKGGGYLLVATDIAARGVDLPEMSHIYNFDLPRTAIDYLHRAGRTCRKPFSDMKCTVTTITVPEERFVLQKYENELMFNSEELIP 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03574 318 Gene3D - 146 317 IPR027417 -
Arst1g03574 318 Gene3D - 1 134 IPR027417 -
Arst1g03574 318 Pfam Helicase conserved C-terminal domain 161 280 IPR001650 -
Arst1g03574 318 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 47, MITOCHONDRIAL 1 309 - -
Arst1g03574 318 SMART helicmild6 198 282 IPR001650 -
Arst1g03574 318 CDD SF2_C_DEAD 151 280 - -
Arst1g03574 318 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 161 318 IPR001650 -
Arst1g03574 318 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1 132 IPR014001 -
Arst1g03574 318 Pfam DEAD/DEAH box helicase 25 116 IPR011545 GO:0003676|GO:0005524
Arst1g03574 318 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 29 305 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03574 Arst-Chr1 97081751 97084515 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g03574 32 307 Eukaryotic Initiation Factors Gene Family AT1G72730 26.224 1.78e-17 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03574 - - ahf:112763379 631.713