Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03573 ATGTCCATGGAGACTCACAGTTTCTCCCTTGGGGTCAGGGTCGCGCCATTTGTAAAGCGAACTGTAACGGTTTATCATGTGCCTCGCTTACGTAACCTTAATCGAACCCACCCTGCAGCTCAGTGCATTCTTCCACAACCACCACTTACTAACCATTCTCCCACTTTGCGAGATATATGCCAGCCTCATGTCCCCACCCATATTTTGCAAAGGATGGAAGAGATTGGATATGTGATGCCTACAGATGTTCAGAGGGAGGCTTTGCCTCATCTTTTCTCTGGCCGTGACTGTATACTTCATGCTCAGACAGGTTCTGGGAAGACACTTACATACCTGCTTTTGATTTATTCCATCATCAACACTTTGAAATCTTCTGTGCAAGCGCTTGTTGTCGTCCCCACTCGTGAACTTGGCATGCAAGTCACTAAAGTTGCAAGGATGTTGGCAGCAAAGCCAACTGGAGTCGACGGGGAGCAGAAGTCGTGTACCATCATGGCTCTCTTGGATGGAGGAACATTGAGAAGACACAAGAGTTGGTTAAAGGTTGACTTCATTTTCAGTTCTTCAAAGCAAGTTAGTTCTCTTAGAAAGCTTTTGACTTCATATTCATCGTGCAATAACCGTCAGACAGTTTTTGCAAGTGCATCTATACCACAGCACAGACGATTTCTTCACGATTGTGTGCAGCAAAAATGGACAAAGAGTGATGTGATCCATATCCATGTCAGTCCAGTGGAGCCCATGCCATCTCGCCTGTGTCATAGATTTATAATATGCAATAACAAAAGGAAACTACAAACCCTATTATCCTTGATTCAATCTGATGCACCTGAGTCTGGCATTATATTTGTTGGTGAACAGTCTGAGAAGTCCAAAAAGGCTGGAAACGCTCCATCAACAGACCTTGTCATTGACTTTTTGAAGACATCATATGAAGGGCCTTTAGATATTGTCCTTCTCGAGGATGACATGAATTTCAACTCACGCGCAGTTTCATTGTTGGAGGTTCGAAAAGGAGGTGGATATCTGCTTGTAGCAACAGATATAGCTGCTAGAGGAGTTGACCTTCCTGAAATGTCTCATATCTACAACTTTGACTTGCCAAGGACTGCCATTGATTATCTTCATCGAGCAGGCAGGACTTGTAGGAAACCTTTTTCTGACATGAAATGTACTGTTACCACCATTACAGTTCCCGAGGAGAGGTTTGTTCTGCAGAAATATGAAAATGAGTTGATGTTTAACTCTGAGGAGCTTATTCCATAA 1266 0.4352 MSMETHSFSLGVRVAPFVKRTVTVYHVPRLRNLNRTHPAAQCILPQPPLTNHSPTLRDICQPHVPTHILQRMEEIGYVMPTDVQREALPHLFSGRDCILHAQTGSGKTLTYLLLIYSIINTLKSSVQALVVVPTRELGMQVTKVARMLAAKPTGVDGEQKSCTIMALLDGGTLRRHKSWLKVDFIFSSSKQVSSLRKLLTSYSSCNNRQTVFASASIPQHRRFLHDCVQQKWTKSDVIHIHVSPVEPMPSRLCHRFIICNNKRKLQTLLSLIQSDAPESGIIFVGEQSEKSKKAGNAPSTDLVIDFLKTSYEGPLDIVLLEDDMNFNSRAVSLLEVRKGGGYLLVATDIAARGVDLPEMSHIYNFDLPRTAIDYLHRAGRTCRKPFSDMKCTVTTITVPEERFVLQKYENELMFNSEELIP 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03573 421 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 47, MITOCHONDRIAL 188 412 - -
Arst1g03573 421 CDD SF2_C_DEAD 254 383 - -
Arst1g03573 421 Pfam DEAD/DEAH box helicase 81 193 IPR011545 GO:0003676|GO:0005524
Arst1g03573 421 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 59 383 IPR027417 -
Arst1g03573 421 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 88 235 IPR014001 -
Arst1g03573 421 SMART ultradead3 76 251 IPR014001 -
Arst1g03573 421 Pfam Helicase conserved C-terminal domain 264 383 IPR001650 -
Arst1g03573 421 Gene3D - 46 191 IPR027417 -
Arst1g03573 421 SMART helicmild6 301 385 IPR001650 -
Arst1g03573 421 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 264 421 IPR001650 -
Arst1g03573 421 Gene3D - 249 420 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03573 Arst-Chr1 97081585 97084515 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g03573 67 404 Eukaryotic Initiation Factors Gene Family AT3G13920 24.796 3.39e-21 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03573 - - ahf:112763379 821.231