Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03494 ATGATGTGGTCTGCTCCTCGTTCTGCTTTATCCGCCATGGCCCTTGAGCCACCGCCCTCTCCCCAACCTTCCTCTGCCACCAGCAATGATGGATTGCAAAGCAAACAAAGAGAGCAGAATGAAGCAAAGCAGAGATCAATAATAAGGTCTCTAAGGAGGCTAACTGCGCTATCAACAGGTTCACTTCCAGATGTGGAACCTCCAAGAAGTGAGGATGTCTCTGTATCTAGTATGAAGAGTTGTCCGAGTCCAGGATCCGAAAGCTCCTCTTCCAACACCGGTAGCCCTTCTAATTCCGGGGAGCAGTCAGATTTAAAAGGCAACAATAACAATAATAATTGGAATGGCATTGTTAGTATTCTGAAGAAAGGATCCCAGATGCCCCTCTATACCTTAACCTCAATCAAGGAGGCTCCCTATTTCAAAAAGAGAACCTCCGCCGAACGAATCCCAGAGGAATTTTCTGCAATTCTTAAACAAGGATCATCTCTTAATCCCGAGGCTTATCGCTTTAAAGCGTCCTGGAAATTATTCACTCTCGCAGATCTCCAGGCCGCGACCAATAATTTCAGCCAGGAGAATTTGATCGGGCAGGGAGGTTATGGTGAGGTTTACAAAGGCCAATTGGCAGATGGAACCTTTGTAGCAATTAAAAGGCTAACAAGAGGGGACCAAGAAGAAATGACTGCAGATTTTTTGTCTGAGCTTGGGATTATAGTGCATGTGGACCACCCCAATATTGCTAAATTGATTGGATATGGAGTTGAAGGTGGAATGCATCTTGTTCTTCAGTTGTCTCCACATGGCAGCCTAGCTTCCATACTATATGGACCTAGAGAGAAACTGAATTGGAACATGAGGTATAAGATTGCATTGGGGACTGCTGAAGGCCTCCACTATCTGCATGCACAATGTCAAAGAAGGATTATTCATAGAGATATCAAGGCTGCTAATATATTGCTTTCAGAGGATTTTGAGCCACAGATAGCTGATTTTGGACTATCTAAGTGGTTACCTGACAAATGGACTCACCATACTGTCTCCAAAGTAGAAGGCACATTCGGTTACCTTCCTCCTGAATACTTCATGCATGGTATTGTTGATGAAAAAACTGATGTATTTGCTTATGGAGTGCTATTATTGGAGCTCATTACCGGCCGTCCGGCTTTGGACAAAGCTCAGAAAAGTCTTGTGATGTGGGCAAAACCACTGATATCCAAAAGCAAAATGGACGAGCTTATTGATCCATGTCTTGCTGGTGCCTATGATGAAGAGCAGATGAAATATATAATCTTAACAGCTTCTTTGTGTATAGCGGAGTCGACCGTTCGACCGCGAATGCATCAGGTATTGCAGATAGCAAAAGGTGAAGAAGGCAGCATGGAGTTAGTTAGGGAACTCCTGGAACCTTTATGTGATGATGAGTTCCTTGAAGAAGAGTTTCCTTCACCTGAGAGTTCCAATGACATATCTAAACATTTGCAGACTATTGGACAAGATTAA 1503 0.4365 MMWSAPRSALSAMALEPPPSPQPSSATSNDGLQSKQREQNEAKQRSIIRSLRRLTALSTGSLPDVEPPRSEDVSVSSMKSCPSPGSESSSSNTGSPSNSGEQSDLKGNNNNNNWNGIVSILKKGSQMPLYTLTSIKEAPYFKKRTSAERIPEEFSAILKQGSSLNPEAYRFKASWKLFTLADLQAATNNFSQENLIGQGGYGEVYKGQLADGTFVAIKRLTRGDQEEMTADFLSELGIIVHVDHPNIAKLIGYGVEGGMHLVLQLSPHGSLASILYGPREKLNWNMRYKIALGTAEGLHYLHAQCQRRIIHRDIKAANILLSEDFEPQIADFGLSKWLPDKWTHHTVSKVEGTFGYLPPEYFMHGIVDEKTDVFAYGVLLLELITGRPALDKAQKSLVMWAKPLISKSKMDELIDPCLAGAYDEEQMKYIILTASLCIAESTVRPRMHQVLQIAKGEEGSMELVRELLEPLCDDEFLEEEFPSPESSNDISKHLQTIGQD 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03494 500 MobiDBLite consensus disorder prediction 479 500 - -
Arst1g03494 500 MobiDBLite consensus disorder prediction 73 111 - -
Arst1g03494 500 PANTHER OS08G0249100 PROTEIN 67 462 IPR046958 -
Arst1g03494 500 MobiDBLite consensus disorder prediction 1 111 - -
Arst1g03494 500 ProSitePatterns Serine/Threonine protein kinases active-site signature. 309 321 IPR008271 GO:0004672|GO:0006468
Arst1g03494 500 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 267 467 - -
Arst1g03494 500 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK1 166 265 - -
Arst1g03494 500 Gene3D Phosphorylase Kinase; domain 1 155 264 - -
Arst1g03494 500 ProSitePatterns Protein kinases ATP-binding region signature. 196 218 IPR017441 GO:0005524
Arst1g03494 500 SUPERFAMILY Protein kinase-like (PK-like) 171 453 IPR011009 -
Arst1g03494 500 SMART serkin_6 190 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g03494 500 Pfam Protein kinase domain 191 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g03494 500 Gene3D Transferase(Phosphotransferase) domain 1 267 466 - -
Arst1g03494 500 ProSiteProfiles Protein kinase domain profile. 190 464 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03494 Arst-Chr1 95992726 95995170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g03494 133 450 Trihelix Transcription Factor Family AT1G68690 41.566 4.91e-70 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Arst1g03494 Pkinase 4.3e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03494 - - lja:Lj6g3v1915960.1 537.724