Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03460 ATGCGGGGATGTTATAACAAAAACCTGTTCTTGTACCACCTCACTGTCATCACAAGAACCCCATCACCCTCCTTTCTGATCCCTTCATCCCCTTCCCCTGTTCGTGCTCCCAATTACAGCACACTCACAAAAACCCCGGAAATACAATCCTTTTCGGTGAATTACCTCGTCAACAAGTGCGGGTTCCTCCCAGATTCCGCTCTTCAGGCTTCAAAATACGTCCTTTTTAAGAGTCCCGAGAAACCCGACTCAGTCATCGCACTCTTCAGGAGCTTCGGTTTCTCAGATTTGCAGATTCACAATGTCATTCAGAAATCGCCCAGGGTTCTCCTCAGCAAGCCCAAAGAGACCATCTTGCCCAAGCTCCAGTTCCTCATCTCCAAAGGCGCTTCAAAATCACAACTTGCCCGCATCATCGAGCTCAACCCTGTAATCTTGCAAAGAAGCTTAAAGAAACACCTAATCCCCACTTTCGATTTGTTGAACAATTTCCTTCGTTCTGAAGAAAGGACCGTTGCTTCTATTTTACATTCTGTCCAAATTTTAACTTCTTCAACGTCGCATCGAAATCTTAATTTGCTGGTTGATTTAGGGGTCAGTGAGAGAAGCATGGCAAGGCTACTTCACCAATGGCCTTGGTTGCTTCGATTCAATTCTGCAGGCCTTAAGAGTATGGTAGATGAAGTCATTAAAATGGGGGTTGATCCCGCCAAGGCTAATTTTGTTCCTGCGTTGTATGCTAAGCTGCTTCCAAAGTCCATGTGGGATAGGAAAGTTGAGTTGTACAAGAGTTTTGGATTAACTGATGACAACATTCGTGAGGCTTTTGTGAAGCACCCTTTCTGTATGCTCAAATCTGTGCAGAAAATTGAGGCCTGCATTGAATTCTTTGTCAAAGAACTCGGTTGGAAGCCTGTTGATGTCACCAATTATCCGGTTCTTCTCTCGCTGAATTTGGAGAAAAGGCTTGTTCCCAGGGCTGCTGTCTTGAAGATTCTTATGGCCAATGGTGTCATTAAGAGTTGTCGGCATTTGTTAGCATATACTGTTTCGGAAGAGATGTTCTTTAAGAAGTATGTGAATCGTGGTAAGGATCAAGCACCGGAGTTATTGAAGCTGTATCGGGAGAAAATGAATCTTCCAGTAATGGATAGTAAATTGATGTCTTGA 1170 0.4402 MRGCYNKNLFLYHLTVITRTPSPSFLIPSSPSPVRAPNYSTLTKTPEIQSFSVNYLVNKCGFLPDSALQASKYVLFKSPEKPDSVIALFRSFGFSDLQIHNVIQKSPRVLLSKPKETILPKLQFLISKGASKSQLARIIELNPVILQRSLKKHLIPTFDLLNNFLRSEERTVASILHSVQILTSSTSHRNLNLLVDLGVSERSMARLLHQWPWLLRFNSAGLKSMVDEVIKMGVDPAKANFVPALYAKLLPKSMWDRKVELYKSFGLTDDNIREAFVKHPFCMLKSVQKIEACIEFFVKELGWKPVDVTNYPVLLSLNLEKRLVPRAAVLKILMANGVIKSCRHLLAYTVSEEMFFKKYVNRGKDQAPELLKLYREKMNLPVMDSKLMS 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03460 389 Gene3D Transcription termination factor 3, mitochondrial 61 190 IPR038538 -
Arst1g03460 389 Gene3D Transcription termination factor 3, mitochondrial 191 368 IPR038538 -
Arst1g03460 389 SMART mt_12 136 167 IPR003690 GO:0003690|GO:0006355
Arst1g03460 389 SMART mt_12 273 304 IPR003690 GO:0003690|GO:0006355
Arst1g03460 389 SMART mt_12 305 336 IPR003690 GO:0003690|GO:0006355
Arst1g03460 389 SMART mt_12 205 235 IPR003690 GO:0003690|GO:0006355
Arst1g03460 389 SMART mt_12 100 131 IPR003690 GO:0003690|GO:0006355
Arst1g03460 389 FunFam Mitochondrial transcription termination factor-like 150 367 - -
Arst1g03460 389 Pfam mTERF 188 349 IPR003690 GO:0003690|GO:0006355
Arst1g03460 389 Pfam mTERF 87 218 IPR003690 GO:0003690|GO:0006355
Arst1g03460 389 PANTHER CGI-12 PROTEIN-RELATED 49 362 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03460 Arst-Chr1 95624552 95658807 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Arst1g03460 mTERF 6.1e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03460 K15031 - aew:130771970 279.641