Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03458 ATGTCAAACTCTAGAACCTCATCAGATACACTACACACTCCCTCCTTCATGAAGGGATATGAAGAAGCAAACAACAACAATCAAAACCAGAACCAAATATGCTTGTCTACACTTCTCCAAAGAAACACATCAACATCATCATCATCATGTGGTGAAAAAAGAGGGAGAAGGAAACAAGCAGAGCCAGGTAGGTTTCTTGGTGTGAGAAGAAGACCTTGGGGAAGATATGCTGCTGAGATCAGAGACCCTACAACCAAAGAAAGACATTGGCTTGGTACCTTTGACACTGCTCAAGAAGCTGCTCTTGCTTATGACAGAGCTGCTTTGTCCATGAAAGGAAACCAAGCTAGAACTAACTTCATCTATTCTGATAACATCAACTTCCATGCTCTTCTCACACCTATGGATCTTCAAGCTCTCTTGCCACCACCACCTCCTCCTCCTCCCCCACCATCTTCTTACACTAAACAACTTGCACCTTCCAATCAGAATAAGATTAAGAACAGTAATAGTAATACTAATGTTGTTGCTGCTGCATATGGTTGTTCAGTTCAGGATGATGATAACTTGTTCTTTTCAACAAGTGATCATCATAGTAATAACAACAACTCTGGGTATCTTGAATGCATAGTTCCTGATAAATGTTTCAGGCCTACTGCTACTACTACTGCTGATTCAAGTTCCAACAGTAGTTGTTCAAACAACAACAACTACTCATCAAGAAAGAGCAATGTCAGTGAAAACTCATCATCATTCTCTTGTGATAATAACTTTCCATCAGATTACTTCTGTTATCCAACAAGTGAAGGGTTCTCATCATGGGATTGGAGCTGCAGTGAGCTTTCAGCTATATTTAACAATTCATCATCATCATCATCATCATCATCAAGAAGGGTATTAGAAGGAGGAGGATGCATGGATGCACTGTATCCTATCATAACTGATGAGAACAATAATAACAATACAAGCTTCTATGATGGGGTGATGATGAATAATCATCATAATCATAATAATGCTGCTGCTTCATCTTCTTCAACAAACTGCTCAGTAGACATGGGATACCCACTCTTCTGA 1074 0.3957 MSNSRTSSDTLHTPSFMKGYEEANNNNQNQNQICLSTLLQRNTSTSSSSCGEKRGRRKQAEPGRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAQEAALAYDRAALSMKGNQARTNFIYSDNINFHALLTPMDLQALLPPPPPPPPPPSSYTKQLAPSNQNKIKNSNSNTNVVAAAYGCSVQDDDNLFFSTSDHHSNNNNSGYLECIVPDKCFRPTATTTADSSSNSSCSNNNNYSSRKSNVSENSSSFSCDNNFPSDYFCYPTSEGFSSWDWSCSELSAIFNNSSSSSSSSSRRVLEGGGCMDALYPIITDENNNNNTSFYDGVMMNNHHNHNNAAASSSSTNCSVDMGYPLF 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03458 357 SUPERFAMILY DNA-binding domain 65 122 IPR016177 GO:0003677
Arst1g03458 357 Pfam AP2 domain 67 113 IPR001471 GO:0003700|GO:0006355
Arst1g03458 357 PRINTS Ethylene responsive element binding protein signature 87 103 IPR001471 GO:0003700|GO:0006355
Arst1g03458 357 PRINTS Ethylene responsive element binding protein signature 65 76 IPR001471 GO:0003700|GO:0006355
Arst1g03458 357 MobiDBLite consensus disorder prediction 138 155 - -
Arst1g03458 357 MobiDBLite consensus disorder prediction 221 240 - -
Arst1g03458 357 ProSiteProfiles AP2/ERF domain profile. 64 121 IPR001471 GO:0003700|GO:0006355
Arst1g03458 357 MobiDBLite consensus disorder prediction 156 170 - -
Arst1g03458 357 Gene3D AP2/ERF domain 64 122 IPR036955 GO:0003700|GO:0006355
Arst1g03458 357 SMART rav1_2 64 127 IPR001471 GO:0003700|GO:0006355
Arst1g03458 357 MobiDBLite consensus disorder prediction 51 65 - -
Arst1g03458 357 MobiDBLite consensus disorder prediction 138 170 - -
Arst1g03458 357 CDD AP2 64 120 IPR001471 GO:0003700|GO:0006355
Arst1g03458 357 MobiDBLite consensus disorder prediction 43 66 - -
Arst1g03458 357 MobiDBLite consensus disorder prediction 1 23 - -
Arst1g03458 357 FunFam Ethylene-responsive transcription factor 2 64 122 - -
Arst1g03458 357 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 41 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03458 Arst-Chr1 95599490 95600963 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g03458 30 307 AP2-EREBP Transcription Factor Family AT5G18560 39.385 2.07e-56 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Arst1g03458 AP2 1.6e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03458 - - aip:110263494 578.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g03458 1 95599490 95600963 Arst1g03458 1 95599490 95600963 PCT