Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03443 ATGTTTCATTCTAAGCATCACTCTCTTACAAGAGCTCTTCTCTTCTTCCTCGGCCACACCCCCCCTCTTCCATCGCCATCCACAAAATCTTACCTTCTTCTTCTTCGGCCACAAGCACGCCGCCACTCAACCACCTCCACTCCCGATGACCACCACTCTTTCACTGTCTCCTACCTCACCACCAAGTGCGGCTTCTCCCATGAAGATGCTCTCAGAGCGAACAAGCGCGTTCGCTTTGACACCCCCGTCAAGCCAGATTCCGTCATCTCCTTCTTCGAAGCCCACGGTTTCTCCCTCTCCCAAATCACCACCATCATGTGCAAGATTCCCGTGGTACTCACACGCGACCCCATCAAAGCGATCTTGCCAAAGTTTCAATTTTTGGCATCCAAAGGTGCTTCTCCCTCTGAAATTGTACTCATGACCACAAAGAGTCCCGGCTTCCTGCTTCGAAGCCTTAACCATATAGTATCCTTCTACGAATTGGTAAGGAGGTTCTCTCCCTCTGATCTTAAAGCCATTGCTTATCTAACTGGATGCCCATCATCCATTGCTGATGTTCGTGTGGCTCAAAATGTGAAAATGCTGCTTGATGAAGGGTTGACCAATGCCAACATTCACCATTTGCTTAGAACTAGGCCTTCTGTGCTGTCTTCTGCTGATTTGAAGAAAACAGTTGAGGAAGTGAAGCAATTGGGGTTTGATCCTTCACAGTCTTATTTCAGTGTGGTGTTGCTCACCAAAAGGGCCGTAACTAAGTCCCGATGGGATGCTAAAGTTCATGTCCTTAAGAAATGGGGCTGGTCCGAACAAGATTTTTCAGAGGCCTATAGGAGGCACCCTCAGTTTATGCTACGTTCCGAGGACAAACTCAATGCAGTGATGAGCTTTTGGATCAGTAATCTCGGCTGGGATTCTTCGGCATTTCGCATTAGACCGATGCTTTTTGGATACAGTTTGGAGAAGAGGCTTATTCCTAGAGCTAAGGTTGTCAAATATCTTCTCTCCAATGGTTTAATGAAGAAGAATGCTAGCATAATCACACCGTTTTCTTTGACTGAGGAGCTGTTCCTCAAGAGGTGTATCACATGTTTTGAGGAGAAAGATAGGTCTCGCCTATTAACACTATATCAGGGAGGGTGTTAG 1146 0.4686 MFHSKHHSLTRALLFFLGHTPPLPSPSTKSYLLLLRPQARRHSTTSTPDDHHSFTVSYLTTKCGFSHEDALRANKRVRFDTPVKPDSVISFFEAHGFSLSQITTIMCKIPVVLTRDPIKAILPKFQFLASKGASPSEIVLMTTKSPGFLLRSLNHIVSFYELVRRFSPSDLKAIAYLTGCPSSIADVRVAQNVKMLLDEGLTNANIHHLLRTRPSVLSSADLKKTVEEVKQLGFDPSQSYFSVVLLTKRAVTKSRWDAKVHVLKKWGWSEQDFSEAYRRHPQFMLRSEDKLNAVMSFWISNLGWDSSAFRIRPMLFGYSLEKRLIPRAKVVKYLLSNGLMKKNASIITPFSLTEELFLKRCITCFEEKDRSRLLTLYQGGC 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03443 381 Gene3D Transcription termination factor 3, mitochondrial 67 181 IPR038538 -
Arst1g03443 381 Gene3D Transcription termination factor 3, mitochondrial 182 368 IPR038538 -
Arst1g03443 381 SMART mt_12 274 305 IPR003690 GO:0003690|GO:0006355
Arst1g03443 381 SMART mt_12 306 340 IPR003690 GO:0003690|GO:0006355
Arst1g03443 381 SMART mt_12 207 235 IPR003690 GO:0003690|GO:0006355
Arst1g03443 381 SMART mt_12 103 134 IPR003690 GO:0003690|GO:0006355
Arst1g03443 381 PANTHER CGI-12 PROTEIN-RELATED 51 365 IPR003690 GO:0003690|GO:0006355
Arst1g03443 381 FunFam Mitochondrial transcription termination factor-like 152 368 - -
Arst1g03443 381 Pfam mTERF 256 357 IPR003690 GO:0003690|GO:0006355
Arst1g03443 381 Pfam mTERF 89 235 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03443 Arst-Chr1 95463772 95472680 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Arst1g03443 mTERF 2.1e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03443 K15031 - gmx:102666739 329.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g03443 1 95463772 95472680 Arst1g03443 1 95463772 95472680 ECH
Arst1g03443 1 95463772 95472680 Arst4g01452 4 18446548 18471163 PCT