Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03402 ATGGCTGCGAGGAAGGATTTCGTCGGAGATATCAATCCAACCAAGCTTGCCTGGTCTTTGGTTGTGGGGGTTGCTCGATTGTATGAGTTTCCAAGTCAGTGGAACAAGAATGAGGTGTTTAGCTTGGAGTTGGTTTTACAAGATGAGAAGGGTGATAGAATTCATGCAACCGTTTGTAAGCCTGGGTTGGAGTTGTTCAAAAATAGGATAAAGGAGCATTGTGTTTATAGTATGCAAAATTTTATTGTCAAGCTTAACAATGGAAAGGTTAGGACAACTCCTCACAAGTACAAGCTTAACTTTTATACAAAGACTGTGGTGGCAGCCCTACCTATTGAGACTTTTGCTTTTAACCCATTCAAATTCCGTCCGTTTCATGAACTTGATGAAAATGGTCCAACCGACGGAAATTTATTATTTGATTACATAGGAGAGGTTGTTGGAAAGGAGGAGGTCAGAGGGCTGATTACGCGCACTGGTGATGAAACGAAGCTTATTACACTTCAGTTGGAAGATCTAGAAAAGCACAAAATTAAATGTACACTGTTTGGGGAATTGGTCGATCAAGTTCTTCCACATCTCGAGCGAGATGATGGGGAGCCTTTCATAATGGTGGTTCAGCTCTTTAAGTCCAACATATACTTGAATTCTGTCAATATTCAAAGTATCTACTATGTGTCCACATGTTACTTCAATCCAAACATTCCTGAGGTTATTGACTTCAAGAAAAGCTTGGCAACAGATTTTGTTCCCTGTTCACAACGAATTAGTCAGCTGGAAGCTCAACCTCAATACTCAGTTAGAGATGAGATCAGTGCCGGCATTGTACCAGTGCGCACTATAGAAGAGGTTCTTAATATCACTGAGGAAACGTCATGTTGGATTGTTGGGACCATTGTTTCTCTAGAAGTTGGTAAAGATGATTGGTCCTATATGTCGTGTAAGACATGTCCTAAGAAGGTTGTGCAAAGCAAAGATAGGTATTGGTGTGATAATTGTAGGCGTGTAGGCTTCAAGGTTATGCTAAGGTATAGGCTCCAACTAATTGTGACTGATGGAAGTGGTTGTCTGAACCTCATTGTGTGGAACAAAGAAGCAGAGCAAATGATAGGAAAGGCTGCTGAGAAAGTTAAGGAATTATCTAAATGCGATAAAGGAGATTCATACCCTAAATACCTAGAGAATATGATTGACAAAAGGTTCTTATTCAAGCTTAACATCACATACAAGAATATCAATTCCGTGGAAGGGGTGTACAGCGTCACAAAACTTTCGGATGACGAGTCCCTCATGTCCAGTTATGGTGTGCCCAATTCTTCTTCTGATGCTTCTATGCTACCTAATATCCCTATAGCCGAAACAGACGAAGATAGCAATGGACATGCTGCAGTTTCCCTGTCTAAGGATTCTGCCGTTGAGAGCAACTGTGATAGCTCCTGTCAAACTCCAGCCAAGAGAACCTCTTCTGATGCAGTTGATGACTCCCCAGCAACAGCAGCCCTATCTCCAGATGTTCAGGCATCCGCTAACAAAACATTTAAGAGGAATTGCGGAAGAAAAAAGATTGATTGA 1572 0.4135 MAARKDFVGDINPTKLAWSLVVGVARLYEFPSQWNKNEVFSLELVLQDEKGDRIHATVCKPGLELFKNRIKEHCVYSMQNFIVKLNNGKVRTTPHKYKLNFYTKTVVAALPIETFAFNPFKFRPFHELDENGPTDGNLLFDYIGEVVGKEEVRGLITRTGDETKLITLQLEDLEKHKIKCTLFGELVDQVLPHLERDDGEPFIMVVQLFKSNIYLNSVNIQSIYYVSTCYFNPNIPEVIDFKKSLATDFVPCSQRISQLEAQPQYSVRDEISAGIVPVRTIEEVLNITEETSCWIVGTIVSLEVGKDDWSYMSCKTCPKKVVQSKDRYWCDNCRRVGFKVMLRYRLQLIVTDGSGCLNLIVWNKEAEQMIGKAAEKVKELSKCDKGDSYPKYLENMIDKRFLFKLNITYKNINSVEGVYSVTKLSDDESLMSSYGVPNSSSDASMLPNIPIAETDEDSNGHAAVSLSKDSAVESNCDSSCQTPAKRTSSDAVDDSPATAALSPDVQASANKTFKRNCGRKKID 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03402 523 CDD RPA1_DBD_C 295 413 IPR047192 -
Arst1g03402 523 SUPERFAMILY Nucleic acid-binding proteins 277 424 IPR012340 -
Arst1g03402 523 Gene3D - 269 432 IPR012340 -
Arst1g03402 523 CDD RPA1_DBD_A_like 19 107 - -
Arst1g03402 523 Gene3D - 116 249 IPR012340 -
Arst1g03402 523 SUPERFAMILY Nucleic acid-binding proteins 120 251 IPR012340 -
Arst1g03402 523 Pfam Replication factor-A C terminal domain 304 413 IPR013955 -
Arst1g03402 523 CDD RPA1_DBD_B_like 141 245 - -
Arst1g03402 523 MobiDBLite consensus disorder prediction 475 505 - -
Arst1g03402 523 Gene3D - 7 109 IPR012340 -
Arst1g03402 523 Pfam Domain of unknown function DUF223 43 109 IPR003871 -
Arst1g03402 523 PANTHER OS03G0429900 PROTEIN 8 489 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Arst1g03402 523 SUPERFAMILY Nucleic acid-binding proteins 8 110 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03402 Arst-Chr1 95100166 95104031 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g03402 11 414 Core DNA Replication Machinery Family AT5G08020 25.296 1.05e-18 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03402 - - adu:107463979 1059.28