Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03395 ATGGAGAATGGCAATGCCAATAAGAGCAGCTATGACGACATAAACGGCAAGATAATGCTGATATCGATCGTCATTGTCTCCGTCGTTCTCACCATAATGATATGCTTCCACATCTACGCCCGCTTGTACCTCCGACACTCTCGCCAACTCCGCCGCAATAATCATAGCATCCGCCGCAACGCGCACCACCACCCTCACTTCGTATTCTACGTGAACCCCGCCGTCATGTTGGCCTCCCGCGGCCTCGATGCCTCCGTGATTGCCTCCCTTCCCGTCTTCACCTTCTCCCGCAAGACCCATCCTCACACCGTCGACTGCCCCGTTTGCCTCTCGGAGTTCGAGGAAGGGGAAACGGGTCGGGTCTTGCCCACGTGCAACCACACCTTCCATACTGAATGCATCGATATGTGGTTCCACTCCCACTCCACCTGCCCACTTTGCAGGGCACCCGTGGAGACTCCGAAACGACCCGATTTGGTTATAACTGTGGGCCATTCTGAACCAGGTTCGAGTTTTCAAGGTGATGGACTGAACCAAACTGGACCCGTGGTTTCTCCTAGTTTGGTCCCAAAGGATTCTTCGTCGATTGTGAATGTGAGCGTTGAGGTGCCCGCAAGAAACGAAGATTATGGTTGCCAGTCGCCGTCGTCTTCGTCGTCGTTTCGGTCACCGGTGGGTCGCATGCTGTCGTTGAAGAGGATTCTGAGCAGAGACCAGAAAGCGAGCGCAGTTGGGTGCAGCTCGACGGCAGAGGAAGGTGGACGATCGGAAACTCAGTAA 780 0.5487 MENGNANKSSYDDINGKIMLISIVIVSVVLTIMICFHIYARLYLRHSRQLRRNNHSIRRNAHHHPHFVFYVNPAVMLASRGLDASVIASLPVFTFSRKTHPHTVDCPVCLSEFEEGETGRVLPTCNHTFHTECIDMWFHSHSTCPLCRAPVETPKRPDLVITVGHSEPGSSFQGDGLNQTGPVVSPSLVPKDSSSIVNVSVEVPARNEDYGCQSPSSSSSFRSPVGRMLSLKRILSRDQKASAVGCSSTAEEGGRSETQ 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03395 259 MobiDBLite consensus disorder prediction 241 259 - -
Arst1g03395 259 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 12 155 IPR044675 -
Arst1g03395 259 SMART ring_2 106 147 IPR001841 -
Arst1g03395 259 SUPERFAMILY RING/U-box 86 154 - -
Arst1g03395 259 ProSiteProfiles Zinc finger RING-type profile. 106 148 IPR001841 -
Arst1g03395 259 FunFam E3 ubiquitin-protein ligase ATL6 72 154 - -
Arst1g03395 259 Pfam Ring finger domain 105 148 IPR001841 -
Arst1g03395 259 CDD RING-H2_EL5-like 105 148 - -
Arst1g03395 259 MobiDBLite consensus disorder prediction 236 259 - -
Arst1g03395 259 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 70 154 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03395 Arst-Chr1 94980126 94981416 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g03395 2 243 Rapid Response to Elicitors AT3G16720 43.396 2.64e-55 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03395 - - aip:107638764 488.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g03395 1 94980126 94981416 Arst1g03395 1 94980126 94981416 ECH
Arst1g03395 1 94980126 94981416 Arst4g01378 4 16378432 16379615 PCT