Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03394 ATGGCGGGTGATCATTTCAACACCATGGACGATAAGAAGAGGAAGAAGAGGATCGCCTTGATTAGCGTCTCTTCCATTCTCCTCGTGGCCATGGTTGCTTGCGTTGCAGTGGGAATTGACAAGAGCGCTATGGAAGAAGAAGAAACCAGCAGCACCAACACAAACACAATTGTAAAGAACCAGAAGAACGTGCATGTGATTTGCGAATCAGCGGAGTTCAAAGACACGTGCGAGAAGAGCCTCGAGAAGGCCACCGCCAACGGCACCACCGACACGAAACAACTCATCATTGCTGCCTTCAACGCCACCGCGGAGGAAATTGAGAATCAGATCAACGACTCAAGCCTCGTCCAAAAGTTGGTGACCGACGACAGGAGCAAACAGGCGTTGGATATTTGCAAGGAGGTTCTTGGTTACGCCATTGACGATATCCACAGATCTGTTCACATGATGGAGAAGTTCGAGCTGAGAAGGATCGGTCAGTACGCTTATGACCTCAAGATTTGGATCGCCGGTACACTCGCTCACCAGCAAACTTGCTTGGAAGCCTTCGAGAACGTTCCGACCGAAGCTGGCAAGGAGATGGCTAAGGTTTTGAACACCTCTCTCCAGCTAAGCAGCAACGCCTTGGATATCATCAATGGCGCCAGCAAGATCTACAAGAGCTTCAACTTGGATGCCTTCTTCGGGGATAGTGCCGCCGCCCCATCCCCAGTCCCCGCGGGCAGGAGGCTTCTGTCTGACGTGGATGAGGGTTTGCCTTCGTGGATCGAGCAAGGCCGAAGGAGTCTTCTGGAAGACCCCACTCGTCTGAAACCCGATTGTGTTGTGGCTCAGGACGGCAGCGGAAACTTCAAGACTCTCACGGAGGCCCTCCAGACTGTTCCTAAGAACAACAGGAAGCGTTTCGTCATCTACGTCAAAGCAGGCATCTATAAGGAGTATGTTAACTTGCAGAAGTCCATGTCCCACGTCACCATTATCGGAGATGGCCCCACAAAGACCAGATTCTCCGGCAGCAAGAATTATGTTGATGGTCTCCAGACTTACTACACCTCAACTTTCAGTGTAAATGCCGCTAACTTCATGGCGGTAAATGTTGGGTTTGAGAACACAGCAGGAGCGGAGAAGCACCAAGCGGTGGCACTCCGCGTGACAGCAGATCAAGCAGTGTTCTACAACTGCCACATGGATGGATACCAAGACACGCTATACGTGCAATCACAGAGGCAGTACTACCGCGACTGCACGGTGACGGGCACCATTGACTTCGTGTTTGGTGACGCAGCGGGAGTGTTCCAAAACTGCACCTTCATTGTGAGGAAGCCCTTGGAAACCCAACAATGCATGGTCACTGCTGGTGGAAGGACCAAGATTGATAGCCCAACCGCCCTGGTGTTCCAGGACTGCCGCTTCACGGGCACACCAGAGTTGAAGAGCTTGCCCCGCAAGGTGTCGTACCTTGGAAGGCCATGGAGACTGTTCTCCAAGGTTGTGATAATGGACTCTGATATTGATGATATCTTCAGTCCAGAAGGGTACATGCCGTGGATGGGAACGGCATTCAGGGACACATGCACGTATCTTGAATACAACAACAGGGGACCTGGTGCTGTTACAAAAGGTAGAGTCACATGGCCTGGTGTTAGGGTCGTCACCTCTCTCGAGGCTGATCTATACTACCCTGGAAGGTTCTATGAGATCTCTAACCATACTGAGCGTGATGCTTGGATCGTTGATTCTGGGGTCCCTTACAATCTCGGCCCAAACAGCCCCTTCAAGCTCCCATCCTTATCATTCTCACTCCCATCCATAACTTTCCCTAAGTTGGTTTAA 1836 0.5142 MAGDHFNTMDDKKRKKRIALISVSSILLVAMVACVAVGIDKSAMEEEETSSTNTNTIVKNQKNVHVICESAEFKDTCEKSLEKATANGTTDTKQLIIAAFNATAEEIENQINDSSLVQKLVTDDRSKQALDICKEVLGYAIDDIHRSVHMMEKFELRRIGQYAYDLKIWIAGTLAHQQTCLEAFENVPTEAGKEMAKVLNTSLQLSSNALDIINGASKIYKSFNLDAFFGDSAAAPSPVPAGRRLLSDVDEGLPSWIEQGRRSLLEDPTRLKPDCVVAQDGSGNFKTLTEALQTVPKNNRKRFVIYVKAGIYKEYVNLQKSMSHVTIIGDGPTKTRFSGSKNYVDGLQTYYTSTFSVNAANFMAVNVGFENTAGAEKHQAVALRVTADQAVFYNCHMDGYQDTLYVQSQRQYYRDCTVTGTIDFVFGDAAGVFQNCTFIVRKPLETQQCMVTAGGRTKIDSPTALVFQDCRFTGTPELKSLPRKVSYLGRPWRLFSKVVIMDSDIDDIFSPEGYMPWMGTAFRDTCTYLEYNNRGPGAVTKGRVTWPGVRVVTSLEADLYYPGRFYEISNHTERDAWIVDSGVPYNLGPNSPFKLPSLSFSLPSITFPKLV 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03394 611 Gene3D Invertase/pectin methylesterase inhibitor family protein 60 216 IPR035513 -
Arst1g03394 611 SUPERFAMILY Pectin lyase-like 272 558 IPR011050 -
Arst1g03394 611 Pfam Pectinesterase 274 565 IPR000070 GO:0030599|GO:0042545
Arst1g03394 611 ProSitePatterns Pectinesterase signature 2. 418 427 IPR033131 -
Arst1g03394 611 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 62 214 IPR035513 -
Arst1g03394 611 Pfam Plant invertase/pectin methylesterase inhibitor 64 212 IPR006501 GO:0004857
Arst1g03394 611 NCBIfam pectinesterase inhibitor domain 52 215 IPR006501 GO:0004857
Arst1g03394 611 CDD PMEI-like_3 67 218 - -
Arst1g03394 611 Gene3D - 271 589 IPR012334 -
Arst1g03394 611 PANTHER PECTINESTERASE 22 578 - -
Arst1g03394 611 FunFam Pectinesterase 60 217 - -
Arst1g03394 611 FunFam Pectinesterase 4 271 589 - -
Arst1g03394 611 ProSitePatterns Pectinesterase signature 1. 299 318 IPR018040 -
Arst1g03394 611 SMART PMEI_2 59 212 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03394 Arst-Chr1 94973792 94975714 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g03394 10 606 Carbohydrate Esterase AT3G05610 41.914 1.19e-174 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03394 K01051 - gmx:100800194 788.104