Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03385 ATGGAATCGCGAATTGCCGGTGGCAGCAGCAGCAGCCACCAGTACCACCAAATTCAGCCGGAGGCTTCGACGTCGTCGTTCTGGCCACCGCCGGAGCCTAGTCGGATCTTCGATGAGTTGCCGGAAGCCACCATTATATCCGTGTCTCGGCCAGAGGCCGCCGACATTACCCCCGCTCTCCTCTCTTACACCATTCTTTTTCGCTACAGACAGTTCAAGTGGCAGCTGGTGAAGAAAGCTTCCCAAGTGTTTTATTTACATTTTATGTTAAAGAAGCGCGCCTTTATTGAGGAAATTCATGAGAAGCAAGAGCATGTTAAAGACTGGCTTCAAAATCTAGGAATAGGAGACCTTGCAGCTATGGTGCACATTGATGATGAAGCTGACGATGAAGTCATGCCTTTAAATAATCATCATGATGAAAGTGTTAAAGAAAGAGATGTTCCATCTAGTGCTGCTCTACCAATTCTGCGGCCAGCTTTAGGAACACAAGAGACTACAGCAGACAGGGCAAAGATTGCGATGCAGGGGTATCTCAATCACTTTTTGGGAAATATAACTATTGTTAACTCAAGAGAGGTTTGCAAGTTTCTGGGGGTATCAAAGTTATCCTTTTTACCTGAATATGGTTCCAAGCTACATGAAGATTACGTGATGGTGATGCATCTGCCAAAATTTTCAAAGGATGATAATTCCAGAAAGTGTTGTTTGTCTGATTGTTTTCGTTGTTGTAATGATAACTGGCAGAAGGTTTGGGCAGTACTGAAACCTGGATTCTTGGCACTGCTAGCAGATCCTTTTGATGTACAACCTTTGGACATTATTGCTTTTGATGTACTACCTTCCTCGGATGGGAATGTGGATCATCATCAATCACTGGCACAAGAAATGAAGGATCGAAATCCCTTGCGCCATTCATTTAAGGTAACTTGTGGAAACCGGTGTATTAGAGTTAGAGTAAAAAGTAGTGCTAAAGTTAAAGATTGGGTCACTGCAATTAATGATGCTGGACTCAAGCCCCCTGAAGGATGGTGTCATCCCCACCGCTATGGTTCTTATGCTCCTCCAAGAGGCTTAATCAAAGATGGAAGTCAGGCTCAATGGTTTGTAGATGGTCGTGCCGCATTTGAGGCAATTGCTTCTTCAATCAAGGATGCAAAATCAGAGATATTTATTTGTGGCTGGTGGTTGTGCCCAGAACTGTATCTAAAGCGCCCTTTTCATGCTCATGCTTCATCAAGGCTTGATAATTTGCTGGAAGCAAGAGCTAAGCAAGGGGTCCAGATTTTCGTTCTTATCTACAAAGAGGTAGCCCTTGCTTTGAAAATCAATAGTTCTTATAGCAGGAGAAAGCTTCTTAGCATTCACGAGAATGTGAGGGTATTACGCTATCCTGACCACTTTTCTACTGGTGTTTACCTGTGGTCGCATCATGAGAAACTTGTGATTGTTGACCACCAGATTTGCTTTATTGGAGGACTGGATTTGTGCTTTGGTCGTTATGACACCCCTGAACATAAAGTTGGGGATCTCCCTCCTATTATCTGGCCAGGAAAGGACTATTATAATCCAAGGGAATCCGAACCAAATTCATGGGAAGATATGATGAAAGATGAATTGGACCGTGGAAAATACCCGCGTATGCCTTGGCATGATGTTCATTGTGCACTTTGGGGGCCACCTTGTCGTGACATAGCGAGGCACTTTGTTCAGAGATGGAATTTTGCCAAGAGGAACAAAGCTCCAAATGAGCAAGCGATACCATTACTTATGCCTCGGCATCATATGGTTATTCCACATTACTTGGGAAAGGACACAGAGGTGAAGATTGAATACAGGAATAATGACAACAACAGAACCATGATGAGGGAAGACTCCTTTAGCTCAGCAACTGATGATATTCCTTTACTATTGCCTCGGGAGTCTGGTGGGCTCAATACTTCTGAAGAAGACCCCAGAAGCGGGTCAAGCTCATTTTCATATCTGCGTGACCAGACTGCTAGTAGGCTCAGCAGCGGTCTTTCTTTCTCTTTATGGAAGACCAGAGTTGAACCACTTAGTTCTGATACACCAATGAAGGGTTTTGTAGACAATCTTGATGGTGTGCAAGTGCGTCATCAAAGGAAAATGTCTCTGGATAGAGTATCTCTTGGTGATGTCCAGAATTCAGATCAAGAGTGGTGGAAAACACCAGGACCTGGTGAGCATGGAGGTTTTGCAGAAGACTCTGGACAAGTTGGCCCTCGTGTTTCGTGTCGTTGTCAGGTTATTAGGAGTGTCACTCAATGGTCAGCTGGAACAAGCCAAACCGAAGAAAGCATCCACAAGGCATATTGCTCTCTAATTGAGAAGGCAGAATATTTCATCTACATTGAGAATCAATTTTTTATCTCAGGTCTTTCACGGGATGATGTAATACGAAATCGTGTATCAGAAGCTTTATATCAACGGATTAGGCGAGCTTATGATGATAAGAAAACTTTTAGGGTTATAATTGTCATACCTCTCCTTCCTGGCTTCCAGGGGGGCCTGGACGACAGTGGTGCGGCCTCTGTGAGAGCCATAATGCACTGGCAGTATAGAACTATCTGCCGAGGACAGAATTCTATATTACATAATTTGTATGAACTTCTTGGTTCAAAAATGCATGACTATATCTCTTTCTTCGGCCTCAGGGCATATGGTAGACTTTGTGATAGCGTTCCCTTGGTAACCAGCCAGATCTATGTTCACAGCAAAATCATGATTATTGATGATTGTACATGTTTGATTGGATCTGCTAATATCAATGATAGGAGTTTACTTGGCTCCAGAGATTCTGAGATTGGTGTAGTTATAGAAGACAGAGAACTGATTGATTCCTATATGGATGGAAAGCCTTGGAAGGCAGGAAAATTCTCCTTGACTCTCCGATTGTCACTATGGTCTGAGCATTTAGGTCTTGGAGCAGGAGAGGCCAATCAAATAATGGATCCAGTTGTTGACTCTACCTACAATGACATTTGGTTGGCAAGAGCAAAGGAAAATACTAAAATTTACCAGGATGTCTTTTCTTGTGTTCCTAATGATGTGATACACAACAGATATGCTTTCCGACAAAGCGTTGCTTTTTGGAAAGATAAGATAGGTCACAGTACTATTGATCTAGGGATAGCTCCAAAAAAGTTAGAATATCATCATGACGGAGTTACTGAGAGCATTGATCCCATGGAGAGGTTAGCGTCAGTGAAAGGTCACCTTGTTAGTTTCCCCCTGGAGTTCATGAGCTTAGAAAATCTAAGACCTGCTTTCAATGAAGGCGAGTTCTATGCTGCCCAAGTTTTCCATTGA 3330 0.4315 MESRIAGGSSSSHQYHQIQPEASTSSFWPPPEPSRIFDELPEATIISVSRPEAADITPALLSYTILFRYRQFKWQLVKKASQVFYLHFMLKKRAFIEEIHEKQEHVKDWLQNLGIGDLAAMVHIDDEADDEVMPLNNHHDESVKERDVPSSAALPILRPALGTQETTADRAKIAMQGYLNHFLGNITIVNSREVCKFLGVSKLSFLPEYGSKLHEDYVMVMHLPKFSKDDNSRKCCLSDCFRCCNDNWQKVWAVLKPGFLALLADPFDVQPLDIIAFDVLPSSDGNVDHHQSLAQEMKDRNPLRHSFKVTCGNRCIRVRVKSSAKVKDWVTAINDAGLKPPEGWCHPHRYGSYAPPRGLIKDGSQAQWFVDGRAAFEAIASSIKDAKSEIFICGWWLCPELYLKRPFHAHASSRLDNLLEARAKQGVQIFVLIYKEVALALKINSSYSRRKLLSIHENVRVLRYPDHFSTGVYLWSHHEKLVIVDHQICFIGGLDLCFGRYDTPEHKVGDLPPIIWPGKDYYNPRESEPNSWEDMMKDELDRGKYPRMPWHDVHCALWGPPCRDIARHFVQRWNFAKRNKAPNEQAIPLLMPRHHMVIPHYLGKDTEVKIEYRNNDNNRTMMREDSFSSATDDIPLLLPRESGGLNTSEEDPRSGSSSFSYLRDQTASRLSSGLSFSLWKTRVEPLSSDTPMKGFVDNLDGVQVRHQRKMSLDRVSLGDVQNSDQEWWKTPGPGEHGGFAEDSGQVGPRVSCRCQVIRSVTQWSAGTSQTEESIHKAYCSLIEKAEYFIYIENQFFISGLSRDDVIRNRVSEALYQRIRRAYDDKKTFRVIIVIPLLPGFQGGLDDSGAASVRAIMHWQYRTICRGQNSILHNLYELLGSKMHDYISFFGLRAYGRLCDSVPLVTSQIYVHSKIMIIDDCTCLIGSANINDRSLLGSRDSEIGVVIEDRELIDSYMDGKPWKAGKFSLTLRLSLWSEHLGLGAGEANQIMDPVVDSTYNDIWLARAKENTKIYQDVFSCVPNDVIHNRYAFRQSVAFWKDKIGHSTIDLGIAPKKLEYHHDGVTESIDPMERLASVKGHLVSFPLEFMSLENLRPAFNEGEFYAAQVFH 1109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03385 1109 Gene3D Endonuclease Chain A 359 599 - -
Arst1g03385 1109 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 473 500 IPR001736 GO:0003824
Arst1g03385 1109 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 906 933 IPR001736 GO:0003824
Arst1g03385 1109 CDD PLDc_vPLD1_2_yPLD_like_2 766 950 - -
Arst1g03385 1109 SMART pld_4 906 933 IPR001736 GO:0003824
Arst1g03385 1109 SMART pld_4 473 500 IPR001736 GO:0003824
Arst1g03385 1109 SUPERFAMILY PH domain-like 245 336 - -
Arst1g03385 1109 PIRSF PLD_euk 46 623 IPR016555 GO:0004630|GO:0006654|GO:0048017
Arst1g03385 1109 PIRSF PLD_euk 680 1109 IPR016555 GO:0004630|GO:0006654|GO:0048017
Arst1g03385 1109 FunFam Phospholipase 740 960 - -
Arst1g03385 1109 PIRSF PLD_euk 46 623 IPR016555 GO:0004630|GO:0006654|GO:0048017
Arst1g03385 1109 PIRSF PLD_euk 680 1109 IPR016555 GO:0004630|GO:0006654|GO:0048017
Arst1g03385 1109 SUPERFAMILY Phospholipase D/nuclease 329 593 - -
Arst1g03385 1109 Gene3D Endonuclease Chain A 739 966 - -
Arst1g03385 1109 CDD PH_PLD 189 336 - -
Arst1g03385 1109 SMART PH_update 212 340 IPR001849 -
Arst1g03385 1109 SUPERFAMILY Phospholipase D/nuclease 726 980 - -
Arst1g03385 1109 Pfam PLD-like domain 779 955 IPR025202 -
Arst1g03385 1109 Pfam Phospholipase D Active site motif 473 500 IPR001736 GO:0003824
Arst1g03385 1109 Gene3D - 228 339 IPR011993 -
Arst1g03385 1109 PANTHER PHOSPHOLIPASE D 167 1099 IPR015679 -
Arst1g03385 1109 MobiDBLite consensus disorder prediction 1 30 - -
Arst1g03385 1109 CDD PLDc_vPLD1_2_yPLD_like_1 366 511 - -
Arst1g03385 1109 MobiDBLite consensus disorder prediction 638 660 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03385 Arst-Chr1 94908777 94917248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g03385 9 986 Phospholipase D Gene Family (Wang group) AT3G16785 68.687 0.0 1320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03385 K01115 - gmx:100780514 1771.52