Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03344 ATGAGATTCACGCCATACTTTGCAATTCCAAGTGGTACTATTGTATTATTTGACCGCAAGATGCTTAGGAACTTTCGGAAAGATGGGCACAACTGGAAAAAGAAAAAGGATGGTAAAACTGTTAAAGAAGCTCATGAGCACTTAAAGGTTGGTAACGAAGAAAGGATCCATGTCTATTATGCACATGGACAAGATAACCCAGGCTTTGTTCGTAGATGTTATTGGTTACTTGACAAGAGTTTGGAACACATAGTCCTTGTTCATTATCGTGAAACACAGGAGTTGCAAGCTTCTCCTGCCGCACCCATAAATTCGCACTCTAGTTCTGGCTCTGACCCAAATGCCCCATGGATTTTATCCGAAGAAATAGATTCCGGGATCAAAACTACAAATGCTGGTGAGATTAATAACAATATAACCGTCAAGAATCACGAGCAAAGGCTTCATGAGATTAATACACTTGAATGGGATGACCTAGTGGTTGCAAATGATCCTAACACGTCGACTATTAATGGAGGAGGCAAAGTTCCACATTTTGATCAACAGAATCAAAGTAATCTCAGCAATCAGGTAGCCAACAATCTTTCTGCAGAAATCCCTTCTTTTGATAATCTAACGCAACCAATTGCTGGGAGTCACACTTTTCCGGAGAATCTTAATCTTCAGACAGACAATCAAATGAATCCAAATGAGCAGATAAATCATAATGTCTTAGTTAATGGTGTTTCCTTGGACACTTTGGGCAATGGTGGATTGCAAAGTCAGGATAGCTTTGGAATGTGGGTGAACCATATGTTGTCGGATTCGCCATGTTCAGTAGATGAGTCAGCTGTTGAATCATCAGTGTCATCCATTCACGAATCATATTCATCTCTAGTAGGGGATGATAAGCAAACTTCTTTGCCAGAACAAGTATTTAATCTCACTGATGTGTCACCTGCATGGGTGCCTTCTACTGAGAAATCAAAGATCCTCGTGACTGGATTCTTTCATAAGGATGCTGACCTTTCAAAGTCCAATCTATTGTGTGTCTGTGGTGATGTAAGTGTTCCTGTAGAATGTGTTCAGGTTGGGGTCTACCGATGTTGGGTACCTCCACATTCTCCTGGATTTGTGAATCTCTACTTGAGCTTTGATGGCCATAAACCTATCAGCCAAGTTGTTAATTTTGAGTATCGTACTCCTATTCTGCATGATCCTGTGGCTTTTATGGAAAACAATGACAACTGGGACAAGTTCCAATTCGAGATGAGGCTTTCTTATCTACTTTTTACCAAAAAGAATAGTCTTGATGTTTTCTCGTGTACAGTATCACCTAAGAGACTAAAGGAGGCGAGAAACTTTGCCATCAGAACGTCGTTTATTTCCAATAGTTGGCAATACTTGATGAAGTCAACTCAATACAACAGAATTCCGTATTCACAAGCAAAAGAAGACCTATTTGGAATTTCTTTAAGAAGCAGACTAAAGGAATGGATTTTGGAAAGAATTATTTTAGGCTGTAAGACTACTGAATATGATGCACAAGGCCAAAGTGTAATCCATTTGTGCGCGATTCTGGATTATACTTGGGCTGTTTCCCTATTTTCATGGTCAGGCTTGTCACTGGATTTCCGTGACAAGCTTGGGTGGACAGCTCTTCATTGGGCAGCATATTATGGAAGGGAGAAAATGGTTGCAACTCTTTTGTCGGCTGGGGCAAAGCCAAATTTGGTTACAGATCCAACTCCACAAAATCCTGGTGGACAAACTGCTGCTGATCTCGCATATATGAACGGTTATGATGGCTTAGCAGCATATCTTTCAGAAAAGGCTCTGGTGAGGCAGTTCAATGACATGAGCTTAGCTGGAAATATCAGTGGCCAGCTAGAAACCAACACAACTGACCCAGAAGATCCTGAGAACCTTTCAGAGGACCAGCTGTACCTGAAGGATACATTGGCAGCTTACCGAACAGCTGCTCAGGCAGCAGCACGCATACAAGCTGCATTTAGGGAGCATTCCCTAAAACTGCAAACTGAAACCATTGAGCTTTTGACACCAGAGGCTGAAGCACGCAAAATAGTTGCAGCAATGAAGATTCAGCACGCCTTTAGGAACTTCGAGTCAAGGAAAATGATGAAAGCTGCTGCTCGCATTCAGTACACATACCGCACATGGAAGATTCGCAGAGAATTCCTCAACATGCGTCATCAGGCAATTAAAATTCAAGCTGCTTTCCGGTGCTTTCAATTGAGGAAGCATTATCGTAAAATTTTGTGGTCTGTCGGGGTGGTCGAGAAAGCACTATTGCGTTGGCGTTTAAAGAGAAAAGGTTTGCGTGGGCTGCATGTTAACAATGCCGATCAGAAGGAGGAAGGTGATGGAGAGGAGGAATTCTTTCGAATTGGTAGGAAGCAAGCTGAAGAGCGTGTTGAGAGATCTGTAGTGCGTGTGCAGGCCATGTTCCGTTCAAAGAAGGCACAACAAGATTATAGGAGGATGAAGCTGGCCCTTAATCAAGCAAATCTGGATCGGGAATATGAAGAATTCCTTGGTACGGAAGATAACATGGAAATTTAA 2562 0.4208 MRFTPYFAIPSGTIVLFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNEERIHVYYAHGQDNPGFVRRCYWLLDKSLEHIVLVHYRETQELQASPAAPINSHSSSGSDPNAPWILSEEIDSGIKTTNAGEINNNITVKNHEQRLHEINTLEWDDLVVANDPNTSTINGGGKVPHFDQQNQSNLSNQVANNLSAEIPSFDNLTQPIAGSHTFPENLNLQTDNQMNPNEQINHNVLVNGVSLDTLGNGGLQSQDSFGMWVNHMLSDSPCSVDESAVESSVSSIHESYSSLVGDDKQTSLPEQVFNLTDVSPAWVPSTEKSKILVTGFFHKDADLSKSNLLCVCGDVSVPVECVQVGVYRCWVPPHSPGFVNLYLSFDGHKPISQVVNFEYRTPILHDPVAFMENNDNWDKFQFEMRLSYLLFTKKNSLDVFSCTVSPKRLKEARNFAIRTSFISNSWQYLMKSTQYNRIPYSQAKEDLFGISLRSRLKEWILERIILGCKTTEYDAQGQSVIHLCAILDYTWAVSLFSWSGLSLDFRDKLGWTALHWAAYYGREKMVATLLSAGAKPNLVTDPTPQNPGGQTAADLAYMNGYDGLAAYLSEKALVRQFNDMSLAGNISGQLETNTTDPEDPENLSEDQLYLKDTLAAYRTAAQAAARIQAAFREHSLKLQTETIELLTPEAEARKIVAAMKIQHAFRNFESRKMMKAAARIQYTYRTWKIRREFLNMRHQAIKIQAAFRCFQLRKHYRKILWSVGVVEKALLRWRLKRKGLRGLHVNNADQKEEGDGEEEFFRIGRKQAEERVERSVVRVQAMFRSKKAQQDYRRMKLALNQANLDREYEEFLGTEDNMEI 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03344 853 ProSiteProfiles Ankyrin repeat profile. 542 574 IPR002110 GO:0005515
Arst1g03344 853 Pfam CG-1 domain 10 91 IPR005559 GO:0003677
Arst1g03344 853 Pfam Ankyrin repeats (3 copies) 497 571 IPR002110 GO:0005515
Arst1g03344 853 Gene3D Immunoglobulins 302 396 IPR013783 -
Arst1g03344 853 ProSiteProfiles IQ motif profile. 806 834 IPR000048 GO:0005515
Arst1g03344 853 ProSiteProfiles CG-1 DNA-binding domain profile. 1 98 IPR005559 GO:0003677
Arst1g03344 853 ProSiteProfiles IQ motif profile. 690 716 IPR000048 GO:0005515
Arst1g03344 853 SUPERFAMILY E set domains 307 393 IPR014756 -
Arst1g03344 853 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 10 832 - -
Arst1g03344 853 SMART iq_5 728 750 IPR000048 GO:0005515
Arst1g03344 853 SMART iq_5 705 727 IPR000048 GO:0005515
Arst1g03344 853 SMART iq_5 804 826 IPR000048 GO:0005515
Arst1g03344 853 FunFam calmodulin-binding transcription activator 5 472 612 - -
Arst1g03344 853 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 695 756 IPR027417 -
Arst1g03344 853 Gene3D - 704 753 - -
Arst1g03344 853 Pfam IQ calmodulin-binding motif 733 750 IPR000048 GO:0005515
Arst1g03344 853 SUPERFAMILY Ankyrin repeat 497 604 IPR036770 -
Arst1g03344 853 Coils Coil 818 838 - -
Arst1g03344 853 ProSiteProfiles Ankyrin repeat region circular profile. 542 570 - -
Arst1g03344 853 SMART ANK_2a 581 612 IPR002110 GO:0005515
Arst1g03344 853 SMART ANK_2a 542 571 IPR002110 GO:0005515
Arst1g03344 853 ProSiteProfiles IQ motif profile. 706 735 IPR000048 GO:0005515
Arst1g03344 853 ProSiteProfiles IQ motif profile. 729 753 IPR000048 GO:0005515
Arst1g03344 853 SMART CG_1_2 1 93 IPR005559 GO:0003677
Arst1g03344 853 Gene3D - 484 612 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03344 Arst-Chr1 94502558 94509277 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g03344 11 838 CAMTA Transcription Factor Family AT3G16940 54.874 0.0 865
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Arst1g03344 Ank_2 3.2e-07 CL0465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03344 K21596 - gmx:100793970 1280.39