Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03341 ATGATGATGGCAAATAACTTTGCGGGCCGGTTGGTAGGCTCAGAGATTCATGGATTCCACACATTGCAAGACTTGGATTTGGGAAACATAATGGAGGAAGCAAGAACCAGATGGCTTCGTCCCAATGAGATTCACGCCATACTTTGCAATTCCAAGTACTTCACAATCAATGTCAAGCCAGTGAATTTGCCCACATGTGGTACTATTGTATTATTTGACCGCAAGATGCTTAGGAACTTTCGGAAAGATGGGCACAACTGGAAAAAGAAAAAGGATGGTAAAACTGTTAAAGAAGCTCATGAGCACTTAAAGGTTGGTAACGAAGAAAGGATCCATGTCTATTATGCACATGGACAAGATAACCCAGGCTTTGTTCGTAGATGTTATTGGTTACTTGACAAGAGTTTGGAACACATAGTCCTTGTTCATTATCGTGAAACACAGGAGTTGCAAGCTTCTCCTGCCGCACCCATAAATTCGCACTCTAGTTCTGGCTCTGACCCAAATGCCCCATGGATTTTATCCGAAGAAATAGATTCCGGGATCAAAACTACAAATGCTGGTGAGATTAATAACAATATAACCGTCAAGAATCACGAGCAAAGGCTTCATGAGATTAATACACTTGAATGGGATGACCTAGTGGTTGCAAATGATCCTAACACGTCGACTATTAATGGAGGAGGCAAAGTTCCACATTTTGATCAACAGAATCAAAGTAATCTCAGCAATGTAGCCAACAATCTTTCTGCAGAAATCCCTTCTTTTGATAATCTAACGCAACCAATTGCTGGGAGTCACACTTTTCCGGAGAATCTTAATCTTCAGACAGACAATCAAATGAATCCAAATGAGCAGATAAATCATAATGTCTTAGTTAATGGTGTTTCCTTGGACACTTTGGGCAATGGTGGATTGCAAAGTCAGGATAGCTTTGGAATGTGGGTGAACCATATGTTGTCGGATTCGCCATGTTCAGTAGATGAGTCAGCTGTTGAATCATCAGTGTCATCCATTCACGAATCATATTCATCTCTAGTAGGGGATGATAAGCAAACTTCTTTGCCAGAACAAGTATTTAATCTCACTGATGTGTCACCTGCATGGGTGCCTTCTACTGAGAAATCAAAGATCCTCGTGACTGGATTCTTTCATAAGGATGCTGACCTTTCAAAGTCCAATCTATTGTGTGTCTGTGGTGATGTAAGTGTTCCTGTAGAATGTGTTCAGGTTGGGGTCTACCGATGTTGGGTACCTCCACATTCTCCTGGATTTGTGAATCTCTACTTGAGCTTTGATGGCCATAAACCTATCAGCCAAGTTGTTAATTTTGAGTATCGTACTCCTATTCTGCATGATCCTGTGGCTTTTATGGAAAACAATGACAACTGGGACAAGTTCCAATTCGAGATGAGGCTTTCTTATCTACTTTTTACCAAAAAGAATAGTCTTGATGTTTTCTCGTGTACAGTATCACCTAAGAGACTAAAGGAGGCGAGAAACTTTGCCATCAGAACGTCGTTTATTTCCAATAGTTGGCAATACTTGATGAAGTCAACTCAATACAACAGAATTCCGTATTCACAAGCAAAAGAAGACCTATTTGGAATTTCTTTAAGAAGCAGACTAAAGGAATGGATTTTGGAAAGAATTATTTTAGGCTGTAAGACTACTGAATATGATGCACAAGGCCAAAGTGTAATCCATTTGTGCGCGATTCTGGATTATACTTGGGCTGTTTCCCTATTTTCATGGTCAGGCTTGTCACTGGATTTCCGTGACAAGCTTGGGTGGACAGCTCTTCATTGGGCAGCATATTATGGAAGGGAGAAAATGGTTGCAACTCTTTTGTCGGCTGGGGCAAAGCCAAATTTGGTTACAGATCCAACTCCACAAAATCCTGGTGGACAAACTGCTGCTGATCTCGCATATATGAACGGTTATGATGGCTTAGCAGCATATCTTTCAGAAAAGGCTCTGGTGAGGCAGTTCAATGACATGAGCTTAGCTGGAAATATCAGTGGCCAGCTAGAAACCAACACAACTGACCCAGAAGATCCTGAGAACCTTTCAGAGGACCAGCTGTACCTGAAGGATACATTGGCAGCTTACCGAACAGCTGCTCAGGCAGCAGCACGCATACAAGCTGCATTTAGGGAGCATTCCCTAAAACTGCAAACTGAAACCATTGAGCTTTTGACACCAGAGGCTGAAGCACGCAAAATAGTTGCAGCAATGAAGATTCAGCACGCCTTTAGGAACTTCGAGTCAAGGAAAATGATGAAAGCTGCTGCTCGCATTCAGTACACATACCGCACATGGAAGATTCGCAGAGAATTCCTCAACATGCGTCATCAGGCAATTAAAATTCAAGCTGCTTTCCGGTGCTTTCAATTGAGGAAGCATTATCGTAAAATTTTGTGGTCTGTCGGGGTGGTCGAGAAAGCACTATTGCGTTGGCGTTTAAAGAGAAAAGGTTTGCGTGGGCTGCATGTTAACAATGCCGATCAGAAGGAGGAAGGTGATGGAGAGGAGGAATTCTTTCGAATTGGTAGGAAGCAAGCTGAAGAGCGTGTTGAGAGATCTGTAGTGCGTGTGCAGGCCATGTTCCGTTCAAAGAAGGCACAACAAGATTATAGGAGGATGAAGCTGGCCCTTAATCAAGCAAATCTGGATCGGGAATATGAAGAATTCCTTGGTACGGAAGATAACATGGAAATTTAA 2724 0.4225 MMMANNFAGRLVGSEIHGFHTLQDLDLGNIMEEARTRWLRPNEIHAILCNSKYFTINVKPVNLPTCGTIVLFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNEERIHVYYAHGQDNPGFVRRCYWLLDKSLEHIVLVHYRETQELQASPAAPINSHSSSGSDPNAPWILSEEIDSGIKTTNAGEINNNITVKNHEQRLHEINTLEWDDLVVANDPNTSTINGGGKVPHFDQQNQSNLSNVANNLSAEIPSFDNLTQPIAGSHTFPENLNLQTDNQMNPNEQINHNVLVNGVSLDTLGNGGLQSQDSFGMWVNHMLSDSPCSVDESAVESSVSSIHESYSSLVGDDKQTSLPEQVFNLTDVSPAWVPSTEKSKILVTGFFHKDADLSKSNLLCVCGDVSVPVECVQVGVYRCWVPPHSPGFVNLYLSFDGHKPISQVVNFEYRTPILHDPVAFMENNDNWDKFQFEMRLSYLLFTKKNSLDVFSCTVSPKRLKEARNFAIRTSFISNSWQYLMKSTQYNRIPYSQAKEDLFGISLRSRLKEWILERIILGCKTTEYDAQGQSVIHLCAILDYTWAVSLFSWSGLSLDFRDKLGWTALHWAAYYGREKMVATLLSAGAKPNLVTDPTPQNPGGQTAADLAYMNGYDGLAAYLSEKALVRQFNDMSLAGNISGQLETNTTDPEDPENLSEDQLYLKDTLAAYRTAAQAAARIQAAFREHSLKLQTETIELLTPEAEARKIVAAMKIQHAFRNFESRKMMKAAARIQYTYRTWKIRREFLNMRHQAIKIQAAFRCFQLRKHYRKILWSVGVVEKALLRWRLKRKGLRGLHVNNADQKEEGDGEEEFFRIGRKQAEERVERSVVRVQAMFRSKKAQQDYRRMKLALNQANLDREYEEFLGTEDNMEI 907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03341 907 ProSiteProfiles Ankyrin repeat profile. 596 628 IPR002110 GO:0005515
Arst1g03341 907 Pfam CG-1 domain 33 146 IPR005559 GO:0003677
Arst1g03341 907 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 26 886 - -
Arst1g03341 907 Pfam IQ calmodulin-binding motif 787 804 IPR000048 GO:0005515
Arst1g03341 907 ProSiteProfiles IQ motif profile. 860 888 IPR000048 GO:0005515
Arst1g03341 907 SMART iq_5 759 781 IPR000048 GO:0005515
Arst1g03341 907 SMART iq_5 858 880 IPR000048 GO:0005515
Arst1g03341 907 SMART iq_5 782 804 IPR000048 GO:0005515
Arst1g03341 907 ProSiteProfiles IQ motif profile. 744 770 IPR000048 GO:0005515
Arst1g03341 907 Gene3D - 758 807 - -
Arst1g03341 907 Coils Coil 872 892 - -
Arst1g03341 907 SUPERFAMILY E set domains 361 447 IPR014756 -
Arst1g03341 907 ProSiteProfiles CG-1 DNA-binding domain profile. 27 153 IPR005559 GO:0003677
Arst1g03341 907 Pfam Ankyrin repeats (3 copies) 551 625 IPR002110 GO:0005515
Arst1g03341 907 FunFam calmodulin-binding transcription activator 5 526 666 - -
Arst1g03341 907 Gene3D - 538 666 IPR036770 -
Arst1g03341 907 SMART ANK_2a 596 625 IPR002110 GO:0005515
Arst1g03341 907 SMART ANK_2a 635 666 IPR002110 GO:0005515
Arst1g03341 907 SUPERFAMILY Ankyrin repeat 551 658 IPR036770 -
Arst1g03341 907 SMART CG_1_2 30 148 IPR005559 GO:0003677
Arst1g03341 907 Gene3D Immunoglobulins 356 450 IPR013783 -
Arst1g03341 907 ProSiteProfiles Ankyrin repeat region circular profile. 596 624 - -
Arst1g03341 907 ProSiteProfiles IQ motif profile. 760 789 IPR000048 GO:0005515
Arst1g03341 907 ProSiteProfiles IQ motif profile. 783 807 IPR000048 GO:0005515
Arst1g03341 907 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 709 810 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03341 Arst-Chr1 94502558 94509278 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g03341 30 892 CAMTA Transcription Factor Family AT3G16940 55.889 0.0 927
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Arst1g03341 CG-1 2.7e-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03341 K21596 - gmx:100793970 1385.93