Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03315 ATGGGAACGCCACCAACGGAAGAGCTTATGAAGAAGATCGAGCAGCTAGAGGAAGGTCACGAGCATCTCAAGCAAGAGATGTCAAGGCTCAAGCTTTCTGATGCCACCAGAAGCCACCACCACCATCGCCAGAGGTCTCACTCCGTCTCTCCCCAGCGTTCTAGATTGGGTGCACCGCCGAAGAGGGGACCCGCCGATGGAGCCTCAGCTGCCGCATGGAAGAGAGGCTCTTGTTCCTTTAAGCAATCTTCACCTCTGCAGAGAGAGAGTCGCAGTGATCCCAAAAAAGAAGGTGAAGGAGGTGGTGGTGCAAAGTGTGGTCCTTCCGCCGTGAATTTTACTGATAGACAGTATCTTAATATTTTGCAGTCAATGGGACAGTCCGTTCATATATTGGATCTTACCTCTCGGATAATCTACTGGAACCGGAGTGCCGAAAATCTGTATGGTTATGCTGCGGAGGAAGCTCTTGGGCAGGATGGGATTGAGCTGATTGTTGACCCCAGGGATTTTGCCTTGGCTGAAGATATTGTGAACCGTGTCGTAATGGGAGAGAGCTGGACTGGGCAATTCCCGGTCAAGAACAAGATGGGAGAGCAGTTCTTGGCGGTGGCGACGAATACTCCTTTCTATGATGATGATGGAAGTTTAGTTGGGATTATCTGTGTCTCGAGTGATTCGCGGCTCTTCGTTGAAACGAGAGTTCCGTGCTTGGGTGCAAACAATGCTGAATCAGGTTCAGGCTCTAGGCCTCTTAGAAGTAGCATTTCAAATAAACTTGGCCTTGATACTCAGCAGCCTCTCCAAACTTCTATAGCATCCAAGTTCTCAAATTTGGCATCAAAGGTAAGTAACAAAGTTAAGTCAAGAATCCGGACTGGAGAAAATAACGGTGATCGTGAAAGCGGGAGCGGAGGAAGTCATCAATCTGAGCATAGTTTCTCAGAAGTTGGTGTTGCAGACCACAGAGAGGATGCTAATTCCAGTGGAGCTAGCACACCCAGAGGTGATGTGATGCAGTCCCCTTTTGGTATATTTTCTCATGGTGAGGAAAGATCCCAAGGAAAAACTTTGAAAGAATATGCCGATGATAGTGAAGGAAAATCTATTCACAAGATTATAACGTCTAGGGCTGAAGCATGGATTCAAAAGAAAACAATGGCATGGCCATGGAAAGCAAATGATCAAGAAGGGTCGGAGGCAAAGGATGTCCGTGTTGCTGTGCCTTTCTTGTCAAATGATCATCAAGAAACTCAGAAGCAAGAACGTCAAGGAGGTGAAAGGAATCGCCCTAGTAACAATGAGGCTTCAGGATCCTGGTCGTCGTCAATCAATATTAACAGCACAAGTAGTGCCAGCAGCTGTGGAAGTGCCGGAAGTTGTGCTGTCAATAATAAAGTGGATGTGGACACCGATTGCTTGGATTATGAAATTTTGTGGGAAGACCTGACTATTGGAGAACAAATTGGACAAGGTTCCTGTGGAACTGTATATCATGCTCTGTGGTATGGATCAGATGTTGCGGTCAAGGTATTCTCAAAGCAAGAATATTCAGATGATGTGATACTTTCCTTCAGACAAGAGGTTTCTGTTATTAAAAGGCTTCGGCACCCAAATATTCTTCTCTTTATGGGGGCAGTGACTTCACCTCAACGTCTCTGCATTGTGACAGAGTTTCTCCCACGTGGAAGCTTGTGTCGCTTGTTACACAGAAACACGCCGAAACTTGACTGGAGACGACGAGTTCATATGGCCTTGGATATTGCACGAGGTGTGAATTATCTTCATCACTGCAATCCACCTATCATCCATAGAGATTTGAAGTCATCAAATCTTCTAGTTGATAAGAATTGGACTGTAAAGGTTTGTGACTTTGGTCTTTCACGTCTTAAGCATGAAACATTTCTCACTACTAAGACAGGGAGGGGCACGCCACAATGGATGGCACCAGAAGTTCTTCGTAACGAACCCTCAGATGAGAAGTCCGATGTATACAGCTTTGGAGTAATATTATGGGAACTTGCAACCGAAAAGATCCCTTGGGATAATCTCAACTCAATGCAGGAACATTGCAGGTGA 2079 0.4594 MGTPPTEELMKKIEQLEEGHEHLKQEMSRLKLSDATRSHHHHRQRSHSVSPQRSRLGAPPKRGPADGASAAAWKRGSCSFKQSSPLQRESRSDPKKEGEGGGGAKCGPSAVNFTDRQYLNILQSMGQSVHILDLTSRIIYWNRSAENLYGYAAEEALGQDGIELIVDPRDFALAEDIVNRVVMGESWTGQFPVKNKMGEQFLAVATNTPFYDDDGSLVGIICVSSDSRLFVETRVPCLGANNAESGSGSRPLRSSISNKLGLDTQQPLQTSIASKFSNLASKVSNKVKSRIRTGENNGDRESGSGGSHQSEHSFSEVGVADHREDANSSGASTPRGDVMQSPFGIFSHGEERSQGKTLKEYADDSEGKSIHKIITSRAEAWIQKKTMAWPWKANDQEGSEAKDVRVAVPFLSNDHQETQKQERQGGERNRPSNNEASGSWSSSININSTSSASSCGSAGSCAVNNKVDVDTDCLDYEILWEDLTIGEQIGQGSCGTVYHALWYGSDVAVKVFSKQEYSDDVILSFRQEVSVIKRLRHPNILLFMGAVTSPQRLCIVTEFLPRGSLCRLLHRNTPKLDWRRRVHMALDIARGVNYLHHCNPPIIHRDLKSSNLLVDKNWTVKVCDFGLSRLKHETFLTTKTGRGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQEHCR 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03315 692 ProSitePatterns Serine/Threonine protein kinases active-site signature. 602 614 IPR008271 GO:0004672|GO:0006468
Arst1g03315 692 CDD PAS 125 226 IPR000014 -
Arst1g03315 692 MobiDBLite consensus disorder prediction 321 340 - -
Arst1g03315 692 NCBIfam PAS domain S-box protein 116 226 IPR000014 -
Arst1g03315 692 SUPERFAMILY Protein kinase-like (PK-like) 474 688 IPR011009 -
Arst1g03315 692 MobiDBLite consensus disorder prediction 16 109 - -
Arst1g03315 692 FunFam PAS domain-containing protein tyrosine kinase 476 560 - -
Arst1g03315 692 Pfam Protein tyrosine and serine/threonine kinase 483 685 IPR001245 GO:0004672|GO:0006468
Arst1g03315 692 SMART serkin_6 483 692 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g03315 692 CDD STKc_MAP3K-like 489 688 - -
Arst1g03315 692 MobiDBLite consensus disorder prediction 287 316 - -
Arst1g03315 692 Gene3D PAS domain 126 229 - -
Arst1g03315 692 MobiDBLite consensus disorder prediction 16 34 - -
Arst1g03315 692 MobiDBLite consensus disorder prediction 430 445 - -
Arst1g03315 692 SMART pas_2 116 183 IPR000014 -
Arst1g03315 692 ProSiteProfiles PAS repeat profile. 114 185 IPR000014 -
Arst1g03315 692 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 98 683 - -
Arst1g03315 692 MobiDBLite consensus disorder prediction 409 445 - -
Arst1g03315 692 Gene3D Transferase(Phosphotransferase) domain 1 561 692 - -
Arst1g03315 692 FunFam PAS domain-containing protein tyrosine kinase family protein 561 691 - -
Arst1g03315 692 Pfam PAS fold 117 224 IPR013767 GO:0006355
Arst1g03315 692 Coils Coil 6 33 - -
Arst1g03315 692 MobiDBLite consensus disorder prediction 35 49 - -
Arst1g03315 692 Gene3D Phosphorylase Kinase; domain 1 476 560 - -
Arst1g03315 692 MobiDBLite consensus disorder prediction 298 314 - -
Arst1g03315 692 SUPERFAMILY PYP-like sensor domain (PAS domain) 120 223 IPR035965 -
Arst1g03315 692 ProSiteProfiles Protein kinase domain profile. 483 692 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03315 Arst-Chr1 94354097 94358348 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g03315 1 688 MAP Kinase Kinase Kinase AT3G06620 58.799 0.0 829
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Arst1g03315 PK_Tyr_Ser-Thr 7e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03315 - - pvu:PHAVU_003G114400g 1047.73