Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03309 ATGCTTCAGGCATTCATGAATCTACGCGCTCTCTGTTTGAGGCCATTCGGGCTCGCTGACGACAAGGTCGACACTTCCCCCGTCGAAGTCAACGGCGGCAGCTTCAGAGGCAGCGGAAGCTTCAAAGGCGGCGCCGGCGCAAGAGAAGGCAAGGACAGCCTCCTCTGGTCTCGCGCCGTCGGAAAATATGGCTCCGGCGATTTCTCCATGGCCGTCGTCCAGGCCAATCAGGTCCTTGAAGACCAGAGCCAGATAGAGTCCGGTCCCCTTGGCACCTTTGTTGGCATCTACGACGGTCACGGAGGACCCGACGCCGCGCGATTCGTATGCGATCACCTCTTTCGCCATTTTCAAGCAATATCAGCTGAAGCAAATGGAGGCGTGATCACTGAGACCATCGAGAGGGCATTCCGCCAAACAGAAGAAGGGTATGCTGCTCTTGTGTCAGACTTGTGGAGCACTCGGCCTCAAGTCGCAAGCGCCGGGACTTGTTGTCTGGTTGGAGTGATATTTCAGCAGACACTCTTTGTGGCAAACCTTGGAGACTCCCGCGTTGTATTGGGCAAGAAAGTTGGCAACACAGGGGGCGTTGCTGCAATTCAGCTTTCTACAGAACACAATGCAAATGTTGAAGCTGTGCGGCAGGAGCTTAAAGAGTTACACCCACATGATCCCCAGATTGTTGTCCTCAAACATGGAGTGTGGAGAGTCAAAGGCATTATTCAGATTTCTAGATCTATAGGTGACGTATATATGAAAGACGCACAATTTAACCGGGAACCACTTCCTGCAAAATTCAGACTTCCTGAACCCATGCACATGCCTATCTTGAGTGCTGAACCCGCTATTATTTCTCGTCGACTGCAACCAAATGATTCTTTCATTATATTTGCATCAGATGGCTTATGGGAGCACCTGAGCAATGAAAAGGCTGTGGAAATTGTTAGCAGCAATCCACACACGCGACGCCATTTTCATGATGATATATCTGTTATTGTTTTATTCTTGAACCACGATCTTATATCCAAAGGCACAGTGCTAGACCCACCACTCTCACTTCGAAGCGCACTCGATCACTGA 1080 0.5046 MLQAFMNLRALCLRPFGLADDKVDTSPVEVNGGSFRGSGSFKGGAGAREGKDSLLWSRAVGKYGSGDFSMAVVQANQVLEDQSQIESGPLGTFVGIYDGHGGPDAARFVCDHLFRHFQAISAEANGGVITETIERAFRQTEEGYAALVSDLWSTRPQVASAGTCCLVGVIFQQTLFVANLGDSRVVLGKKVGNTGGVAAIQLSTEHNANVEAVRQELKELHPHDPQIVVLKHGVWRVKGIIQISRSIGDVYMKDAQFNREPLPAKFRLPEPMHMPILSAEPAIISRRLQPNDSFIIFASDGLWEHLSNEKAVEIVSSNPHTGSAKKLVKAALHEAARKREMRYSDLRKIDKKVRRHFHDDISVIVLFLNHDLISKGTVLDPPLSLRSALDH 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03309 391 Pfam Protein phosphatase 2C 90 338 IPR001932 -
Arst1g03309 391 SUPERFAMILY PP2C-like 76 369 IPR036457 -
Arst1g03309 391 ProSiteProfiles PPM-type phosphatase domain profile. 67 368 IPR001932 -
Arst1g03309 391 ProSitePatterns PPM-type phosphatase domain signature. 93 101 IPR000222 GO:0043169
Arst1g03309 391 SMART PP2C_4 54 366 IPR001932 -
Arst1g03309 391 PANTHER PROTEIN PHOSPHATASE 65 366 IPR015655 GO:0004722|GO:0006470
Arst1g03309 391 FunFam Probable protein phosphatase 2C 42 58 376 - -
Arst1g03309 391 Gene3D - 55 377 IPR036457 -
Arst1g03309 391 CDD PP2Cc 68 368 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03309 Arst-Chr1 94295270 94299327 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g03309 1 388 PP2C-type Phosphatase Gene Family AT4G38520 54.912 1.07e-149 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03309 K01102 - gmx:100790813 639.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g03309 1 94295270 94299327 Arst1g03309 1 94295270 94299327 ECH
Arst1g03309 1 94295270 94299327 Arst4g01240 4 12244132 12248110 PCT