Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03305 ATGGCCTCAACAACGGTGGTGTCAAACCCAGCACCAACAAGCACGGACCGGTCACGTGACTCAAAGAGGAAGAAGAAGAAGAAACTGCAGAAAGAATATCTTCAGAGTCACTTCAAATGGAAATCGCAAGCGCAGCAACAAATTTATTCCTCCAAGCTCCACCAGGCCTTAGCGAGAGTCAACCTCGCCTCCACCTCCGTCCCCCGCCGCGGAAAGGCCGTCCGAGAAGCCGCGGACAGAGTCCTCGCCACCACAGCTAAAGGCAAAACACGGTGGAGCCGCGCCATACTCGCCAACCGCAGGCTCAAGCTCAAGTTCTCCAAACAGCACAAGAGACAGAGAGTGGCGCAGCCTGCGCTCACCCGATCCAAGAAGCCACGTGTCAGCGTTTTACGCCTCAAAGGGAAGAAGAACTTACCGGCTGTGCAGAGGAAACTCAGGTTCTTGGCGCGACTCGTTCCCGGTTGCCGGAAAGAACCTGTGCCGGTCATTCTCGAAGAGGCCATCGATTACATACCGGCGCTTGAGATGCAAGTCAGAGCCATGGCTGCTCTTCTCAACCTTCTCTCTGGCTCCGGCTCCGGCGCCGCCGCCTCAGACTCCTCTTCCGGCGCCGGCACAAGCTCGGCGCCGCCAAGCTGA 642 0.5779 MASTTVVSNPAPTSTDRSRDSKRKKKKKLQKEYLQSHFKWKSQAQQQIYSSKLHQALARVNLASTSVPRRGKAVREAADRVLATTAKGKTRWSRAILANRRLKLKFSKQHKRQRVAQPALTRSKKPRVSVLRLKGKKNLPAVQRKLRFLARLVPGCRKEPVPVILEEAIDYIPALEMQVRAMAALLNLLSGSGSGAAASDSSSGAGTSSAPPS 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03305 213 CDD bHLH_AtIBH1_like 136 186 IPR044549 GO:0006355
Arst1g03305 213 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 143 190 IPR036638 GO:0046983
Arst1g03305 213 MobiDBLite consensus disorder prediction 1 15 - -
Arst1g03305 213 MobiDBLite consensus disorder prediction 192 213 - -
Arst1g03305 213 MobiDBLite consensus disorder prediction 1 32 - -
Arst1g03305 213 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 42 189 IPR044660 GO:0006355
Arst1g03305 213 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 126 175 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03305 Arst-Chr1 94229693 94230693 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g03305 37 195 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 58.857 1.72e-50 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03305 - - gmx:100803765 222.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g03305 1 94229693 94230693 Arst4g01236 4 12206322 12214760 PCT