Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03302 ATGGAAGAAGGGAAGAGAGAGAAGAAGAAGAAAGAAGAAGAAGCATCCACCACCACTGCTACTACTATTACTATGGCTAATTCCGTCGCATTTTCCGATGAGATTCCGATCACAAACACAAACACAATCAACACTTCTTACCCTTTCTCAAGCATCTTTGACATGATGCCACTTCCATTACTACCCTCTTATGATCACAAAACTTCTGCCAATGGCTTCATCGACTTGCTCGCTCTCCATGACTACACTCCTTCCTTATTCGATTGCTTTCCCACAACCACCACCGCCGCCGAAGCCACGCCGCAGCAAATCAGCAGCAGCCAGCAGCAGCAGCAGGCTCTGCCGTCGCCGGCGAGCTCCAATGTCCCGGACTGTTCGGAGGTGTTGAACACTCCGGCGTCACCAAACTCGTCGTCGATTTCATCTTCGTCGAACGAAGGCGGCGCCGGCGTCGGCAGCAACAACAACAACGCGGAAGAGCATAACGGTGGGAAGGTAGTTGCTGATGATGAACATGAAGCAGAGGATGAAGAGGCCGATGGATCCAAAGAGAATCAAGACAAGACTAAGAAACAATTGAAAGCAAAGAAGAAGAATCAAAAGAAGCAAAGAGAACCTCGGTTTGCGTTTATGACAAAGAGCGAAGTGGATCATTTAGACGACGGTTACAGATGGCGTAAGTACGGACAGAAAGCAGTGAAAAATAGCCCTTATCCAAGGAGCTACTATCGTTGCACCACATCCGGGTGTGGTGTTAAGAAGCGCGTGGAGCGTTCTTCCGACGATCCAAGCATTGTTGTAACTACCTATGAAGGGCAGCACACTCACCCTTGTCCCGCTACCTCACGCGCCGCACTCGCGTTCATGCACGAACCCTCCTTCGCCACCATTGGATCTTCTTCTCCTCACTTTCTGCTTCCTCATCAACAACACTTCCAGCAACCGCCGCCACCGCCTTCGTTATATAACTCCGCTACTACTACTAATCCAACTCCACCTACTAATGCGTCGTCGTTTGGGACCTTCGTTCTTCAGGATGGAGCTTTTGCTGCAGCTTCTAGGTTGAACATGGATCAAGCTTTCTTGAGAGACCATGGTCTTCTTCAGGACATTGTTCCATCTCAGATCAGGAAGGAGGATAACATCGAATGA 1152 0.4939 MEEGKREKKKKEEEASTTTATTITMANSVAFSDEIPITNTNTINTSYPFSSIFDMMPLPLLPSYDHKTSANGFIDLLALHDYTPSLFDCFPTTTTAAEATPQQISSSQQQQQALPSPASSNVPDCSEVLNTPASPNSSSISSSSNEGGAGVGSNNNNAEEHNGGKVVADDEHEAEDEEADGSKENQDKTKKQLKAKKKNQKKQREPRFAFMTKSEVDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTSGCGVKKRVERSSDDPSIVVTTYEGQHTHPCPATSRAALAFMHEPSFATIGSSSPHFLLPHQQHFQQPPPPPSLYNSATTTNPTPPTNASSFGTFVLQDGAFAAASRLNMDQAFLRDHGLLQDIVPSQIRKEDNIE 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03302 383 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 102 313 IPR044810 GO:0003700
Arst1g03302 383 FunFam WRKY transcription factor 57 205 279 - -
Arst1g03302 383 Pfam WRKY DNA -binding domain 220 277 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst1g03302 383 Gene3D WRKY domain 203 280 IPR036576 GO:0003700|GO:0006355|GO:0043565
Arst1g03302 383 ProSiteProfiles WRKY domain profile. 214 279 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst1g03302 383 MobiDBLite consensus disorder prediction 307 339 - -
Arst1g03302 383 MobiDBLite consensus disorder prediction 98 205 - -
Arst1g03302 383 MobiDBLite consensus disorder prediction 98 161 - -
Arst1g03302 383 SMART WRKY_cls 219 278 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst1g03302 383 SUPERFAMILY WRKY DNA-binding domain 211 279 IPR036576 GO:0003700|GO:0006355|GO:0043565
Arst1g03302 383 Coils Coil 183 203 - -
Arst1g03302 383 MobiDBLite consensus disorder prediction 324 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03302 Arst-Chr1 94144474 94146338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g03302 25 379 WRKY Transcription Factor Family AT5G49520 45.263 1.31e-60 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Arst1g03302 WRKY 2.3e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03302 - - gmx:100788697 300.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g03302 1 94144474 94146338 Arst1g03302 1 94144474 94146338 ECH
Arst4g01234 4 12028211 12029474 Arst1g03302 1 94144474 94146338 PCT