Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03241 ATGCACTTTGATAACGGAGGAGATGCGAATGATCGTTGCCAAACGATGAAGAAGGTGAGGAATAAGATCGGAAAGTATGAGGTTGGTAGAACCATCGGCGGAGGTACATTCGCCAAGGTCAAATTCGCCAAGAACACCGACACCGGAGACAGCGTTGCCATTAAGGTCATGGCTAAGTCCACCATTCTCAAGCATAGAATGGTTGAACAGATTAAAAGAGAGATATCCATTATGAAGATTGTCAGACATCCAAATATAGTTAGGTTGCATGAGGTTTTGGCCAGCAAGACCAAGATCTACATAATTCTTGAGTTCGTAATGGGAGGGGAATTATATGATAAAATTGCTCAGCAGGGAAAGCTTTCTGAAAATGATTCTAGGCGCTACTTTCAACAACTTATAGATGCTGTTGCTCATTGTCACAAGAAGGGTGTGTACCACAGAGACTTGAAGCCTGAAAACCTTCTTCTTGATGCATTCGGAAACTTGAAAGTATCTGACTTCGGATTGAGTGCATTGACAAAGCAGGGTGTTGATGTTCTCCACACGACGTGTGGGACCCCAAATTATGTTGCACCTGAGGTGCTAGGCAATCAAGGTTATGATGGTGCAGCAGCTGATGTTTGGTCATGTGGAGTCATTCTGTATGTTTTGATGGCTGGATATCTTCCTTTTGAGGAGGCTGACCTTCCTGCACTGTACAACAGGATCAATGCTGCAGAGTTTGTTTGTCCATTTTGGTTTTCTGCTGGGGCAAAGACATTGATACAGAAAATTCTGGATCCTAATCCTAAAACACGGATGAAAATTGAAGAAATAAGGAAAGATCCATGGTTCAGGAGAAACTATGTTCCGGTCAGACTTAGTGAAGATGTGGAAGTCAATTTGGATGATGTTCAGGCAGTTTTTGACGATATTGAGGACAAATATGTTTCTGAGAAGTCAGAAAGTACTGAGGGAGGTCCTTTGATAATGAATGCATTTGAGATGATTACCTTATCTCAAGGGTTGAATCTTTCACCGCTATTTGACAGGCGTCAGGATTATGTGAAGCGGCAAACCCGTTTTGTTTCACGTAAACCAGCAAGGGTTATAATTTCATATATTGAAGCTGCTGCAGAGTCAATGGGTCTTAAGGTCCATTCTCGTAACTATAAGATGAGGCTTGAAGGAGTTGCTGCAAATAATGTTGCTCAATTTGCAGTGGTTTTGGAGGTGTTTGAGGTTGCACCATCACTTTTCATGGTAGATGTTCAAAAGGCAGCTGGTGATACTCTCGAATATCACAAGTTTTACAAGAATCTCTGTGGAAAATTAGAAAGCATTATCTGGAGACCGATGGAGCCAGCCCCAGATTCTGGTATGCTTCGACAAATGACTGTATGA 1386 0.4214 MHFDNGGDANDRCQTMKKVRNKIGKYEVGRTIGGGTFAKVKFAKNTDTGDSVAIKVMAKSTILKHRMVEQIKREISIMKIVRHPNIVRLHEVLASKTKIYIILEFVMGGELYDKIAQQGKLSENDSRRYFQQLIDAVAHCHKKGVYHRDLKPENLLLDAFGNLKVSDFGLSALTKQGVDVLHTTCGTPNYVAPEVLGNQGYDGAAADVWSCGVILYVLMAGYLPFEEADLPALYNRINAAEFVCPFWFSAGAKTLIQKILDPNPKTRMKIEEIRKDPWFRRNYVPVRLSEDVEVNLDDVQAVFDDIEDKYVSEKSESTEGGPLIMNAFEMITLSQGLNLSPLFDRRQDYVKRQTRFVSRKPARVIISYIEAAAESMGLKVHSRNYKMRLEGVAANNVAQFAVVLEVFEVAPSLFMVDVQKAAGDTLEYHKFYKNLCGKLESIIWRPMEPAPDSGMLRQMTV 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03241 461 CDD CIPK_C 326 436 - -
Arst1g03241 461 Pfam NAF domain 322 381 IPR004041 GO:0007165
Arst1g03241 461 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 21 434 - -
Arst1g03241 461 SUPERFAMILY Protein kinase-like (PK-like) 23 316 IPR011009 -
Arst1g03241 461 ProSitePatterns Protein kinases ATP-binding region signature. 32 64 IPR017441 GO:0005524
Arst1g03241 461 ProSiteProfiles Protein kinase domain profile. 26 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g03241 461 ProSiteProfiles NAF domain profile. 320 344 IPR018451 GO:0007165
Arst1g03241 461 SMART serkin_6 26 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g03241 461 Gene3D Kinase associated domain 1, KA1 324 445 - -
Arst1g03241 461 FunFam Non-specific serine/threonine protein kinase 17 105 - -
Arst1g03241 461 FunFam Non-specific serine/threonine protein kinase 19 320 - -
Arst1g03241 461 Gene3D Transferase(Phosphotransferase) domain 1 16 323 - -
Arst1g03241 461 FunFam Non-specific serine/threonine protein kinase 319 445 - -
Arst1g03241 461 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Arst1g03241 461 Pfam Protein kinase domain 26 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03241 Arst-Chr1 93494460 93499866 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g03241 16 387 CBL-interacting serine-threonine protein kinases AT5G35410 74.194 0.0 591
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Arst1g03241 Pkinase 9.4e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03241 - - gmx:100811380 772.696