Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03219 ATGTTTCCGCTTTCTTCCTTATCAGAAGCAGAGAAGGTTCTAGGAGAAATATCTAATTATAAAGTTCAGTTGGAGGTGGTAAAAGCCAAAATCAAGTCTGCTAAATCAAAAGATGAGTCTGAATCTGTTAAATTTACTCAAAAGAATCTGATTAACAAGATATATACTAATTCTGCAGATGCCAAGATTCCTGCTACTCTTGAGTATCTCGGAACTTTCATTGAGGCAGGTTGCAAGTTTCTTATATTTGCGCACCATCAGCCAATGATAGATGCGATACATGAGTGCCTTCTTAAGAAAAAAGTGGGTTGCATCTGGATTGATGGAGGTACACCCGCTGCATCAAGGCAACAATTGGTTACAGATTTCCAGGAAAAGGATTATATCAAGGCAGCTGTACTATCCATTAAAGCGGGAGGAGTTGGATTAACTTTAACTGCTGCAAGCACAGTTATCTTTACAGAACAATCCTGGACTCCAGGTGACCTAATTCAGGCCAAAGATCGTGCGTATAGAATTGGTCAGGTATTCTCACACTCATTAAGTAGAAAGGAGAGAGTTGTTACTAGTTGCATGACAACATTAAGAAAACAGATAATCTCAAATGAAAAGAACTCTCATATCTAA 627 0.3828 MFPLSSLSEAEKVLGEISNYKVQLEVVKAKIKSAKSKDESESVKFTQKNLINKIYTNSADAKIPATLEYLGTFIEAGCKFLIFAHHQPMIDAIHECLLKKKVGCIWIDGGTPAASRQQLVTDFQEKDYIKAAVLSIKAGGVGLTLTAASTVIFTEQSWTPGDLIQAKDRAYRIGQVFSHSLSRKERVVTSCMTTLRKQIISNEKNSHI 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03219 208 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 66 208 IPR001650 -
Arst1g03219 208 Coils Coil 17 37 - -
Arst1g03219 208 SMART helicmild6 91 174 IPR001650 -
Arst1g03219 208 PANTHER DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER 23 176 - -
Arst1g03219 208 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 53 176 IPR027417 -
Arst1g03219 208 Gene3D - 4 200 IPR027417 -
Arst1g03219 208 Pfam Helicase conserved C-terminal domain 66 174 IPR001650 -
Arst1g03219 208 CDD SF2_C_SNF 60 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03219 Arst-Chr1 93362136 93365392 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g03219 45 198 RAD5 or RAD16-like Gene Family AT1G02670 30.000 5.49e-15 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03219 K14440 - adu:107482564 333.569