Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03218 ATGAGCCTTCTAAAGAACTGCCGAAGTTTTCTGTCAAACTTTTTCTTCATTCCAGCGGGCATGTTGCAGCGAAATTCCAATATGACCAGGTTATGGATGTTTCCGCTTTCTTCCTTATCAGAAGCAGAGAAGGTTCTAGGAGAAATATCTAATTATAAAGTTCAGTTGGAGGTGGTAAAAGCCAAAATCAAGTCTGCTAAATCAAAAGATGAGTCTGAATCTGTTAAATTTACTCAAAAGAATCTGATTAACAAGATATATACTAATTCTGCAGATGCCAAGATTCCTGCTACTCTTGAGTATCTCGGAACTTTCATTGAGGCAGGTTGCAAGTTTCTTATATTTGCGCACCATCAGCCAATGATAGATGCGATACATGAGTGCCTTCTTAAGAAAAAAGTGGGTTGCATCTGGATTGATGGAGGTACACCCGCTGCATCAAGGCAACAATTGGTTACAGATTTCCAGGAAAAGGATTATATCAAGGCAGCTGTACTATCCATTAAAGCGGGAGGAGTTGGATTAACTTTAACTGCTGCAAGCACAGTTATCTTTACAGAACAATCCTGGACTCCAGGTGACCTAATTCAGGCCAAAGATCGTGCGTATAGAATTGGTCAGGTATTCTCACACTCATTAAGTAGAAAGGAGAGAGTTGTTACTAGTTGCATGACAACATTAAGAAAACAGATAATCTCAAATGAAAAGAACTCTCATATCTAA 723 0.3887 MSLLKNCRSFLSNFFFIPAGMLQRNSNMTRLWMFPLSSLSEAEKVLGEISNYKVQLEVVKAKIKSAKSKDESESVKFTQKNLINKIYTNSADAKIPATLEYLGTFIEAGCKFLIFAHHQPMIDAIHECLLKKKVGCIWIDGGTPAASRQQLVTDFQEKDYIKAAVLSIKAGGVGLTLTAASTVIFTEQSWTPGDLIQAKDRAYRIGQVFSHSLSRKERVVTSCMTTLRKQIISNEKNSHI 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03218 240 CDD SF2_C_SNF 92 207 - -
Arst1g03218 240 PANTHER DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER 55 208 - -
Arst1g03218 240 SMART helicmild6 123 206 IPR001650 -
Arst1g03218 240 Coils Coil 49 69 - -
Arst1g03218 240 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 98 240 IPR001650 -
Arst1g03218 240 Pfam Helicase conserved C-terminal domain 98 206 IPR001650 -
Arst1g03218 240 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 85 208 IPR027417 -
Arst1g03218 240 Gene3D - 21 231 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03218 Arst-Chr1 93360827 93365392 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g03218 77 230 RAD5 or RAD16-like Gene Family AT1G02670 30.000 1.62e-14 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03218 K14440 - adu:107482564 397.512