Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03216 ATGTTTCATGGCAGGTTATGGATGTTTCCGCTTTCTTCCTTATCAGAAGCAGAGAAGGTTCTAGGAGAAATATCTAATTATAAAGTTCAGTTGGAGGTGGTAAAAGCCAAAATCAAGTCTGCTAAATCAAAAGATGAGTCTGAATCTGTTAAATTTACTCAAAAGAATCTGATTAACAAGATATATACTAATTCTGCAGATGCCAAGATTCCTGCTACTCTTGAGTATCTCGGAACTTTCATTGAGGCAGGTTGCAAGTTTCTTATATTTGCGCACCATCAGCCAATGATAGATGCGATACATGAGTGCCTTCTTAAGAAAAAAGTGGGTTGCATCTGGATTGATGGAGGTACACCCGCTGCATCAAGGCAACAATTGGTTACAGATTTCCAGGAAAAGGATTATATCAAGGCAGCTGTACTATCCATTAAAGCGGGAGGAGTTGGATTAACTTTAACTGCTGCAAGCACAGTTATCTTTACAGAACAATCCTGGACTCCAGGTGACCTAATTCAGGCCAAAGATCGTGCGTATAGAATTGGTCAGGTATTCTCACACTCATTAAGTAGAAAGGAGAGAGTTGTTACTAGTTGCATGACAACATTAAGAAAACAGATAATCTCAAATGAAAAGAACTCTCATATCTAA 648 0.3843 MFHGRLWMFPLSSLSEAEKVLGEISNYKVQLEVVKAKIKSAKSKDESESVKFTQKNLINKIYTNSADAKIPATLEYLGTFIEAGCKFLIFAHHQPMIDAIHECLLKKKVGCIWIDGGTPAASRQQLVTDFQEKDYIKAAVLSIKAGGVGLTLTAASTVIFTEQSWTPGDLIQAKDRAYRIGQVFSHSLSRKERVVTSCMTTLRKQIISNEKNSHI 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03216 215 Gene3D - 11 207 IPR027417 -
Arst1g03216 215 SMART helicmild6 98 181 IPR001650 -
Arst1g03216 215 PANTHER DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER 30 183 - -
Arst1g03216 215 Pfam Helicase conserved C-terminal domain 73 181 IPR001650 -
Arst1g03216 215 CDD SF2_C_SNF 67 182 - -
Arst1g03216 215 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 73 215 IPR001650 -
Arst1g03216 215 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 60 183 IPR027417 -
Arst1g03216 215 Coils Coil 24 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03216 Arst-Chr1 93360827 93365392 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g03216 52 205 RAD5 or RAD16-like Gene Family AT1G02670 30.000 5.99e-15 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03216 K14440 - adu:107482564 341.273