Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03206 ATGATCATGATCTCGTTAAGAAAGTGTGATCCACAAACTTCGCGCGCCAAGACCCTCACTGCCAAGTGGAAGCTTTGCCCCAAGGGAAAAAATGAGCCTTCTAAAGAACTGCCGAAGTTTTCTGTCAAACTTTTTCTTCATTCCAGCGGGCATGTTGCAGCGAAATTCCAATATGACCAGGCTATGTTTCATGGCAGGTTATGGATGTTTCCGCTTTCTTCCTTATCAGAAGCAGAGAAGGTTCTAGGAGAAATATCTAATTATAAAGTTCAGTTGGAGGTGGTAAAAGCCAAAATCAAGTCTGCTAAATCAAAAGATGAGTCTGAATCTGTTAAATTTACTCAAAAGAATCTGATTAACAAGATATATACTAATTCTGCAGATGCCAAGATTCCTGCTACTCTTGAGTATCTCGGAACTTTCATTGAGGCAGGTTGCAAGTTTCTTATATTTGCGCACCATCAGCCAATGATAGATGCGATACATGAGTGCCTTCTTAAGAAAAAAGTGGGTTGCATCTGGATTGATGGAGGTACACCCGCTGCATCAAGGCAACAATTGGTTACAGATTTCCAGGAAAAGGATTATATCAAGGCAGCTGTACTATCCATTAAAGCGGGAGGAGTTGGATTAACTTTAACTGCTGCAAGCACAGTTATCTTTACAGAACAATCCTGGACTCCAGGTGACCTAATTCAGGCCAAAGATCGTGCGTATAGAATTGGTCAGGTCTCATCAGTAAATATATACTAG 753 0.409 MIMISLRKCDPQTSRAKTLTAKWKLCPKGKNEPSKELPKFSVKLFLHSSGHVAAKFQYDQAMFHGRLWMFPLSSLSEAEKVLGEISNYKVQLEVVKAKIKSAKSKDESESVKFTQKNLINKIYTNSADAKIPATLEYLGTFIEAGCKFLIFAHHQPMIDAIHECLLKKKVGCIWIDGGTPAASRQQLVTDFQEKDYIKAAVLSIKAGGVGLTLTAASTVIFTEQSWTPGDLIQAKDRAYRIGQVSSVNIY 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03206 250 Coils Coil 85 105 - -
Arst1g03206 250 SMART helicmild6 159 242 IPR001650 -
Arst1g03206 250 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 121 250 IPR027417 -
Arst1g03206 250 CDD SF2_C_SNF 128 250 - -
Arst1g03206 250 Gene3D - 69 250 IPR027417 -
Arst1g03206 250 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 134 250 IPR001650 -
Arst1g03206 250 Pfam Helicase conserved C-terminal domain 134 242 IPR001650 -
Arst1g03206 250 PANTHER DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER 91 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03206 Arst-Chr1 93360480 93366385 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g03206 113 249 RAD5 or RAD16-like Gene Family AT1G05120 30.496 4.91e-15 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03206 K14440 - adu:107462208 457.218