Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03205 ATGATCATGATCTCGTTAAGAAAGTGTGATCCACAAACTTCGCGCGCCAAGACCCTCACTGCCAAGTGGAAGCTTTGCCCCAAGGGAAAAAATGAGCCTTCTAAAGAACTGCCGAAGTTTTCTGTCAAACTTTTTCTTCATTCCAGCGGGCATGTTGCAGCGAAATTCCAATATGACCAGGCTATGTTTCATGGCAGGTTATGGATGTTTCCGCTTTCTTCCTTATCAGAAGCAGAGAAGGTTCTAGGAGAAATATCTAATTATAAAGTTCAGTTGGAGGTGGTAAAAGCCAAAATCAAGTCTGCTAAATCAAAAGATGAGTCTGAATCTGTTAAATTTACTCAAAAGAATCTGATTAACAAGATATATACTAATTCTGCAGATGCCAAGATTCCTGCTACTCTTGAGTATCTCGGAACTTTCATTGAGGCAGGTTGCAAGTTTCTTATATTTGCGCACCATCAGCCAATGATAGATGCGATACATGAGTGCCTTCTTAAGAAAAAAGTGGGTTGCATCTGGATTGATGGAGGTACACCCGCTGCATCAAGGCAACAATTGGTTACAGATTTCCAGGAAAAGGATTATATCAAGGCAGCTGTACTATCCATTAAAGCGGGAGGAGTTGGATTAACTTTAACTGCTGCAAGCACAGTTATCTTTACAGAACAATCCTGGACTCCAGGTGACCTAATTCAGGCCAAAGATCGTGCGTATAGAATTGGTCAGGTATTCTCACACTCATTAAGTAGAAAGGAGAGAGTTGTTACTAGTTGCATGACAACATTAAGAAAACAGATAATCTCAAATGAAAAGAACTCTCATATCTAA 831 0.4007 MIMISLRKCDPQTSRAKTLTAKWKLCPKGKNEPSKELPKFSVKLFLHSSGHVAAKFQYDQAMFHGRLWMFPLSSLSEAEKVLGEISNYKVQLEVVKAKIKSAKSKDESESVKFTQKNLINKIYTNSADAKIPATLEYLGTFIEAGCKFLIFAHHQPMIDAIHECLLKKKVGCIWIDGGTPAASRQQLVTDFQEKDYIKAAVLSIKAGGVGLTLTAASTVIFTEQSWTPGDLIQAKDRAYRIGQVFSHSLSRKERVVTSCMTTLRKQIISNEKNSHI 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03205 276 Coils Coil 85 105 - -
Arst1g03205 276 PANTHER DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER 91 244 - -
Arst1g03205 276 Gene3D - 69 266 IPR027417 -
Arst1g03205 276 CDD SF2_C_SNF 128 243 - -
Arst1g03205 276 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 134 276 IPR001650 -
Arst1g03205 276 SMART helicmild6 159 242 IPR001650 -
Arst1g03205 276 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 121 244 IPR027417 -
Arst1g03205 276 Pfam Helicase conserved C-terminal domain 134 242 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03205 Arst-Chr1 93360478 93365392 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g03205 113 243 RAD5 or RAD16-like Gene Family AT1G05120 31.852 2.28e-14 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03205 K14440 - adu:107462208 456.447