Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03204 ATGATCATGATCTCGTTAAGAAAGTGTGATCCACAAACTTCGCGCGCCAAGACCCTCACTGCCAAGTGGAAGCTTTGCCCCAAGGGAAAAAATGAGCCTTCTAAAGAACTGCCGAAGTTTTCTGTCAAACTTTTTCTTCATTCCAGCGGGCATGTTGCAGCGAAATTCCAATATGACCAGGCTATGTTTCATGGCAGGTTATGGATGTTTCCGCTTTCTTCCTTATCAGAAGCAGAGAAGGTTCTAGGAGAAATATCTAATTATAAAGTTCAGTTGGAGGTGGTAAAAGCCAAAATCAAGTCTGCTAAATCAAAAGATGAGTCTGAATCTGTTAAATTTACTCAAAAGAATCTGATTAACAAGATATATACTAATTCTGCAGATGCCAAGATTCCTGCTACTCTTGAGTATCTCGGAACTTTCATTGAGAAGAAAAAAGTGGGTTGCATCTGGATTGATGGAGGTACACCCGCTGCATCAAGGCAACAATTGGTTACAGATTTCCAGGAAAAGGATTATATCAAGGCAGCTGTACTATCCATTAAAGCGGGAGGAGTTGGATTAACTTTAACTGCTGCAAGCACAGTTATCTTTACAGAACAATCCTGGACTCCAGGTGACCTAATTCAGGCCAAAGATCGTGCGTATAGAATTGGTCAGGTATTCTCACACTCATTAAGTAGAAAGGAGAGAGTTGTTACTAGTTGCATGACAACATTAAGAAAACAGATAATCTCAAATGAAAAGAACTCTCATATCTAA 762 0.3976 MIMISLRKCDPQTSRAKTLTAKWKLCPKGKNEPSKELPKFSVKLFLHSSGHVAAKFQYDQAMFHGRLWMFPLSSLSEAEKVLGEISNYKVQLEVVKAKIKSAKSKDESESVKFTQKNLINKIYTNSADAKIPATLEYLGTFIEKKKVGCIWIDGGTPAASRQQLVTDFQEKDYIKAAVLSIKAGGVGLTLTAASTVIFTEQSWTPGDLIQAKDRAYRIGQVFSHSLSRKERVVTSCMTTLRKQIISNEKNSHI 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03204 253 Coils Coil 85 105 - -
Arst1g03204 253 SMART helicmild6 136 219 IPR001650 -
Arst1g03204 253 PANTHER DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER 91 221 - -
Arst1g03204 253 CDD SF2_C_SNF 133 220 - -
Arst1g03204 253 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 98 253 IPR001650 -
Arst1g03204 253 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 133 221 IPR027417 -
Arst1g03204 253 Gene3D - 84 234 IPR027417 -
Arst1g03204 253 Pfam Helicase conserved C-terminal domain 122 219 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03204 Arst-Chr1 93360471 93365392 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g03204 135 243 RAD5 or RAD16-like Gene Family AT1G02670 32.432 2.08e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03204 K14440 - adu:107462208 393.66