Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03203 ATGATCATGATCTCGTTAAGAAAGTGTGATCCACAAACTTCGCGCGCCAAGACCCTCACTGCCAAGTGGAAGCTTTGCCCCAAGGGAAAAAATGAGCCTTCTAAAGAACTGCCGAAGTTTTCTGTCAAACTTTTTCTTCATTCCAGCGGGCATGTTGCAGCGAAATTCCAATATGACCAGGCTATGTTTCATGGCAGGTTATGGATGTTTCCGCTTTCTTCCTTATCAGAAGCAGAGAAGGTTCTAGGAGAAATATCTAATTATAAAGTTCAGGCAGGTTGCAAGTTTCTTATATTTGCGCACCATCAGCCAATGATAGATGCGATACATGAGTGCCTTCTTAAGAAAAAAGTGGGTTGCATCTGGATTGATGGAGGTACACCCGCTGCATCAAGGCAACAATTGGTTACAGATTTCCAGGAAAAGGATTATATCAAGGCAGCTGTACTATCCATTAAAGCGGGAGGAGTTGGATTAACTTTAACTGCTGCAAGCACAGTTATCTTTACAGAACAATCCTGGACTCCAGGTGACCTAATTCAGGCCAAAGATCGTGCGTATAGAATTGGTCAGGTATTCTCACACTCATTAAGTAGAAAGGAGAGAGTTGTTACTAGTTGCATGACAACATTAAGAAAACAGATAATCTCAAATGAAAAGAACTCTCATATCTAA 675 0.4133 MIMISLRKCDPQTSRAKTLTAKWKLCPKGKNEPSKELPKFSVKLFLHSSGHVAAKFQYDQAMFHGRLWMFPLSSLSEAEKVLGEISNYKVQAGCKFLIFAHHQPMIDAIHECLLKKKVGCIWIDGGTPAASRQQLVTDFQEKDYIKAAVLSIKAGGVGLTLTAASTVIFTEQSWTPGDLIQAKDRAYRIGQVFSHSLSRKERVVTSCMTTLRKQIISNEKNSHI 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03203 224 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 77 224 IPR001650 -
Arst1g03203 224 CDD SF2_C_SNF 80 191 - -
Arst1g03203 224 Gene3D - 25 216 IPR027417 -
Arst1g03203 224 Pfam Helicase conserved C-terminal domain 89 190 IPR001650 -
Arst1g03203 224 PANTHER DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER 77 192 - -
Arst1g03203 224 SMART helicmild6 107 190 IPR001650 -
Arst1g03203 224 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 69 192 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03203 Arst-Chr1 93360438 93365392 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g03203 11 214 RAD5 or RAD16-like Gene Family AT1G02670 28.638 4.37e-14 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03203 K14440 - adu:107482564 301.212