Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03187 ATGGCTCTGGCCACCTGCCTCACCTCTATCCTCCTCCAGGATGACCACGATCACCACCTCCGGTACTCCCACCCTGACCACCAACACCTCTACCATAGTGGCCCCGTAACCACCTCCACCACCTCCCTGACCTCCCGTCACCACCGTTGTACCCTCCTCCACCACCACCACTTCCCTGACCCCGTCGTCACCTCCATCATTTCCGTCATCACCACCTTCGTCCTCACCGCTACCCTCATCCTCTCCGCCTCTGCCTCCACGTCGGCCTCTACCTCACCACCACCTCTAGCTCCTCTACGGCCGCGACCCCTCCCCCCTCGCCGTCCAACCATTCCCAACCCTTCCCACCAAACCCCATTTCCGATTCCCGTCCTCAAAAAAGAATCAAAAGACCCTGTGGTTCAGTTTCTGGAAGGAGAACTTCTCATAGTGTGTTTGTATTCCAATCCAGGTGGACGCTTTGCCTCAAGGGAAAAAATGAGCCTTCTAAAGAACTGCCGAAGTTTTCTGTCAAACTTTTTCTTCATTCCAGTGGCCATGTTGCAGCGAAATTCCAATATGACCAGGTTATGGATGTTCCCGCTTTCTTCCTTGTCCGAAGCAGAGAAGGTTCTAGGAGAAATATCTAATTATAAAGTTCAGTTGGAGGCGGTAAAAGCCAAAATCAAATCTGCTAAATCAAAAGATGAGTCTGAATCTCTTAAATTTACTCAAAAGAAACTGATTAACAAGGCAGGTTGCAAGTTTCTTATATTTGCGCACCATCAGCCAATGATAGATGCGATACATGAGTGCCTTCTTAAGAAAAAAGTGGGTTGCATCTGGATTGATGGAGGTACACCCGCTGCATCAAGGCAACAATTGGTTACAGATTTCCAGGAAAAGGATTATATCAAGGCAGCTGTACTATCCATTAAAGCGGGAGGAGTTGGATTAACTTTAACTGCTGCAAGCACAGTTATCTTTACAGAACAATCCTGGAGTCTAGGTGACCTAATTCAGGCCAAAGATCGTGCATATAGAATTGGTCAGGTATTCTCACACTCATTAAGTAGAAAGGAGAGAGTTGTTACTAGTTGCATGACAACATTAAGAAAACAGATAATCTCAAATGAAAAGAACTCTCATATCTAA 1134 0.4691 MALATCLTSILLQDDHDHHLRYSHPDHQHLYHSGPVTTSTTSLTSRHHRCTLLHHHHFPDPVVTSIISVITTFVLTATLILSASASTSASTSPPPLAPLRPRPLPPRRPTIPNPSHQTPFPIPVLKKESKDPVVQFLEGELLIVCLYSNPGGRFASREKMSLLKNCRSFLSNFFFIPVAMLQRNSNMTRLWMFPLSSLSEAEKVLGEISNYKVQLEAVKAKIKSAKSKDESESLKFTQKKLINKAGCKFLIFAHHQPMIDAIHECLLKKKVGCIWIDGGTPAASRQQLVTDFQEKDYIKAAVLSIKAGGVGLTLTAASTVIFTEQSWSLGDLIQAKDRAYRIGQVFSHSLSRKERVVTSCMTTLRKQIISNEKNSHI 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03187 377 Coils Coil 201 228 - -
Arst1g03187 377 Gene3D - 166 364 IPR027417 -
Arst1g03187 377 CDD SF2_C_SNF 244 344 - -
Arst1g03187 377 PANTHER DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER 223 345 - -
Arst1g03187 377 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 237 377 IPR001650 -
Arst1g03187 377 SMART helicmild6 260 343 IPR001650 -
Arst1g03187 377 Pfam Helicase conserved C-terminal domain 243 343 IPR001650 -
Arst1g03187 377 MobiDBLite consensus disorder prediction 94 119 - -
Arst1g03187 377 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 224 345 IPR027417 -
Arst1g03187 377 MobiDBLite consensus disorder prediction 86 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03187 Arst-Chr1 93288855 93352244 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g03187 219 344 RAD5 or RAD16-like Gene Family AT1G05120 29.921 6.56e-12 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03187 K14440 - adu:107482564 472.626