Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03183 ATGGCTCTGGCCACCTGCCTCACCTCTATCCTCCTCCAGGATGACCACGATCACCACCTCCGGTACTCCCACCCTGACCACCAACACCTCTACCATAGTGGCCCCGTAACCACCTCCACCACCTCCCTGACCTCCCGTCACCACCGTTGTACCCTCCTCCACCACCACCACTTCCCTGACCCCGTCGTCACCTCCATCATTTCCGTCATCACCACCTTCGTCCTCACCGCTACCCTCATCCTCTCCGCCTCTGCCTCCACGTCGGCCTCTACCTCACCACCACCTCTAGCTCCTCTACGGCCGCGACCCCTCCCCCCTCGCCGTCCAACCATTCCCAACCCTTCCCACCAAACCCCATTTCCGATTCCCGTCCTCAAAAAAGAATCAAAAGACCCTGTGGTTCAGTTTCTGGAAGGAGAACTTCTCATAGTGTGTTTGTATTCCAATCCAGGTGGACGCTTTGCCTCAAGGGAAAAAATGAGCCTTCTAAAGAACTGCCGAAGTTTTCTGTCAAACTTTTTCTTCATTCCAGTGGCCATGTTGCAGCGAAATTCCAATATGACCAGGTTATGGATGTTCCCGCTTTCTTCCTTGTCCGAAGCAGAGAAGGTTCTAGGAGAAATATCTAATTATAAAGTTCAGTTGGAGGCGGTAAAAGCCAAAATCAAATCTGCTAAATCAAAAGATGAGTCTGAATCTCTTAAATTTACTCAAAAGAAACTGATTAACAAGGCAGGTTGCAAGTTTCTTATATTTGCGCACCATCAGCCAATGATAGATGCGATACATGAGTGCCTTCTTAAGAAAAAAGTGGGTTGCATCTGGATTGATGGAGGTACACCCGCTGCATCAAGGCAACAATTGGTTACAGATTTCCAGGAAAAGGATTATATCAAGGCAGCTGTACTATCCATTAAAGCGGGAGGAGTTGGATTAACTTTAACTGCTGCAAGCACAGTTATCTTTACAGAACAATCCTGGAGTCTAGGTGACCTAATTCAGGCCAAAGATCGTGCATATAGAATTGGTCAGGTCTCATCAGTAAATATATACTAG 1056 0.4801 MALATCLTSILLQDDHDHHLRYSHPDHQHLYHSGPVTTSTTSLTSRHHRCTLLHHHHFPDPVVTSIISVITTFVLTATLILSASASTSASTSPPPLAPLRPRPLPPRRPTIPNPSHQTPFPIPVLKKESKDPVVQFLEGELLIVCLYSNPGGRFASREKMSLLKNCRSFLSNFFFIPVAMLQRNSNMTRLWMFPLSSLSEAEKVLGEISNYKVQLEAVKAKIKSAKSKDESESLKFTQKKLINKAGCKFLIFAHHQPMIDAIHECLLKKKVGCIWIDGGTPAASRQQLVTDFQEKDYIKAAVLSIKAGGVGLTLTAASTVIFTEQSWSLGDLIQAKDRAYRIGQVSSVNIY 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03183 351 Coils Coil 201 228 - -
Arst1g03183 351 Pfam Helicase conserved C-terminal domain 243 343 IPR001650 -
Arst1g03183 351 PANTHER DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER 223 351 - -
Arst1g03183 351 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 237 351 IPR001650 -
Arst1g03183 351 SMART helicmild6 260 343 IPR001650 -
Arst1g03183 351 Gene3D - 164 351 IPR027417 -
Arst1g03183 351 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 224 351 IPR027417 -
Arst1g03183 351 MobiDBLite consensus disorder prediction 94 119 - -
Arst1g03183 351 MobiDBLite consensus disorder prediction 86 121 - -
Arst1g03183 351 CDD SF2_C_SNF 244 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03183 Arst-Chr1 93287862 93352244 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g03183 219 350 RAD5 or RAD16-like Gene Family AT1G05120 28.571 2.82e-12 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03183 K14440 - adu:107482564 411.764