Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03180 ATGGCTCTGGCCACCTGCCTCACCTCTATCCTCCTCCAGGATGACCACGATCACCACCTCCGGTACTCCCACCCTGACCACCAACACCTCTACCATAGTGGCCCCGTAACCACCTCCACCACCTCCCTGACCTCCCGTCACCACCGTTGTACCCTCCTCCACCACCACCACTTCCCTGACCCCGTCGTCACCTCCATCATTTCCGTCATCACCACCTTCGTCCTCACCGCTACCCTCATCCTCTCCGCCTCTGCCTCCACGTCGGCCTCTACCTCACCACCACCTCTAGCTCCTCTACGGCCGCGACCCCTCCCCCCTCGCCGTCCAACCATTCCCAACCCTTCCCACCAAACCCCATTTCCGATTCCCGTCCTCAAAAAAGAATCAAAAGACCCTGTGGTTCAGTTTCTGGAAGGAGAACTTCTCATAGTGTGTTTGTATTCCAATCCAGGTGGACGCTTTGCCTCAAGGGAAAAAATGAGCCTTCTAAAGAACTGCCGAAGTTTTCTGTCAAACTTTTTCTTCATTCCAGTGGCCATGTTGCAGCGAAATTCCAATATGACCAGGTTATGGATGTTCCCGCTTTCTTCCTTGTCCGAAGCAGAGAAGGTTCTAGGAGAAATATCTAATTATAAAGTTCAGTTGGAGGCGGTAAAAGCCAAAATCAAATCTGCTAAATCAAAAGATGAGTCTGAATCTCTTAAATTTACTCAAAAGAAACTGATTAACAAGGCAGGTTGCAAGTTTCTTATATTTGCGCACCATCAGCCAATGATAGATGCGATACATGAGTGCCTTCTTAAGAAAAAAGTGGGTTGCATCTGGATTGATGGAGGTACACCCGCTGCATCAAGGCAACAATTGGTTACAGATTTCCAGGAAAAGGATTATATCAAGGCAGCTGTACTATCCATTAAAGCGGGAGGAGTTGGATTAACTTTAACTGCTGCAAGCACAGTTATCTTTACAGAACAATCCTGGAGTCTAGGTGACCTAATTCAGGCCAAAGATCGTGCATATAGAATTGGTCAGTCTTTCGCCGCTTGGTATAGCATTGACTTAACATTTATTATGCATTGA 1080 0.4787 MALATCLTSILLQDDHDHHLRYSHPDHQHLYHSGPVTTSTTSLTSRHHRCTLLHHHHFPDPVVTSIISVITTFVLTATLILSASASTSASTSPPPLAPLRPRPLPPRRPTIPNPSHQTPFPIPVLKKESKDPVVQFLEGELLIVCLYSNPGGRFASREKMSLLKNCRSFLSNFFFIPVAMLQRNSNMTRLWMFPLSSLSEAEKVLGEISNYKVQLEAVKAKIKSAKSKDESESLKFTQKKLINKAGCKFLIFAHHQPMIDAIHECLLKKKVGCIWIDGGTPAASRQQLVTDFQEKDYIKAAVLSIKAGGVGLTLTAASTVIFTEQSWSLGDLIQAKDRAYRIGQSFAAWYSIDLTFIMH 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03180 359 Coils Coil 201 228 - -
Arst1g03180 359 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 224 346 IPR027417 -
Arst1g03180 359 Gene3D - 165 348 IPR027417 -
Arst1g03180 359 PANTHER DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER 223 345 - -
Arst1g03180 359 CDD SF2_C_SNF 244 344 - -
Arst1g03180 359 Pfam Helicase conserved C-terminal domain 243 343 IPR001650 -
Arst1g03180 359 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 237 359 IPR001650 -
Arst1g03180 359 SMART helicmild6 260 343 IPR001650 -
Arst1g03180 359 MobiDBLite consensus disorder prediction 94 119 - -
Arst1g03180 359 MobiDBLite consensus disorder prediction 86 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03180 Arst-Chr1 93286275 93352244 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g03180 219 344 RAD5 or RAD16-like Gene Family AT1G05120 29.921 5.94e-12 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03180 K14440 - ahf:112723272 434.106