Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03156 ATGTTCTTCCTCCGAGTTCACTCGGTCGACTCGGAGCAGCCTCTGGACCCTGAATCCATCTTCTCCGAAAACGATGAAGATTCGAGCCCTAAATTCAGGGAGCGAAGAGGGGTTCTCCACTTGTTCCGGAGCTCCTCTCACTCCTCGATCCCAAGCCCTAGCTCTCGCTCTTCCCTTGTCTTCATTCTCGCCGTTCCCAATTACCTCTCCTTCGATGACCTCATTCGCTGGTGCGGACCCCACCTCCACCATCTCCACCGCCTCCTCTTCATCAGGAATGATGGAATGGAAGATCGCTACAGTGTGCTGATTGAACTTCAGGATCAGCGTGCAGCTGATGCGTTTTATACCAATTTCAATGGCAAGACTTTTTCTCCTGGAGAGGCAGAGGTGTGCCATATCCTGTTTTTGGTTTCTGTGGAGTACTCAGAATGTGCAGATATTGCTGGGACTCCTCCTGATGGATGTACTGAAATACCAACTTGTCCAGTTTGCCTCGAGAGATTGGACCCGGATAGAAGTGGAATACTCACTACACTTTGCGATCACTCCTTTCAATGCCCTTGTGTTTCAAAGTGGACGTACTTGTCTTGCCAGGTCTGTCGATTCTGTCAACAGCAAGATGAGAAGCCAAGTTGTTTTGTTTGTGGAACGTTAGATGATTCCTGGGTTTGTATGATTTGCGGGTTTGTTGGATGTGGAAGATATAAGGAAGGACATGCTATCCAGCATTGGAAAGACACCCAGCACTGTTATTCTCTTGATTTCAAGACACAGCAAATATGGGATTATGTAGGTGACAGTTACGTCCATCGGCTGAACCAGAATCAATCCAAAGTTGATGGCAAGTTCGAGGGAATGAATTACCGCTGTATTCTACAGAATGGAGACTGTGATGAGTGTGAATGTCATGATGATCTAGAAATTGATGGAGCCCTCTACAACAGCAAAGTTGAGGCAATTTTGGATGAATACAACCGTCTTCTAACATCTCAGCTGGAAACTCAAAGACAATATTATGAATCTTTGCTGGCAGAGGCAAAAAGCAAAGTGGACAGTTCTGTCTCTGAAGCAGTGGAGAAAGCTGTAACTTCTGGATTGCAGGACATCCAAGATAAACTGGAAAAGTGTACAGAAGAGAGAAATGGTGTTGCTGAGGAGAATAAGAAGCTCATACAAAATCAACAGCTGTGGCGAAACAAAATTAAAGAAGCTGAAGAGAGGGAAGCCGCATTAGTAAAATTCATGAACCAAAAGATAACTGATATGGAGGAACAGATTAGGGATGTCAAGATTTTTGTGCAAGCACAAAAAACAATTGATAAGATGACAGATTCAAATGGAATCAAGGACGGAACAGTGTTACCAGTGGCTTATGAGCAATCTACTCCCGGCAACAGTAAGAGAAACAGGAAGTCTGGTCGAAGGCGAAACTAG 1437 0.4495 MFFLRVHSVDSEQPLDPESIFSENDEDSSPKFRERRGVLHLFRSSSHSSIPSPSSRSSLVFILAVPNYLSFDDLIRWCGPHLHHLHRLLFIRNDGMEDRYSVLIELQDQRAADAFYTNFNGKTFSPGEAEVCHILFLVSVEYSECADIAGTPPDGCTEIPTCPVCLERLDPDRSGILTTLCDHSFQCPCVSKWTYLSCQVCRFCQQQDEKPSCFVCGTLDDSWVCMICGFVGCGRYKEGHAIQHWKDTQHCYSLDFKTQQIWDYVGDSYVHRLNQNQSKVDGKFEGMNYRCILQNGDCDECECHDDLEIDGALYNSKVEAILDEYNRLLTSQLETQRQYYESLLAEAKSKVDSSVSEAVEKAVTSGLQDIQDKLEKCTEERNGVAEENKKLIQNQQLWRNKIKEAEEREAALVKFMNQKITDMEEQIRDVKIFVQAQKTIDKMTDSNGIKDGTVLPVAYEQSTPGNSKRNRKSGRRRN 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03156 478 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 178 284 IPR013083 -
Arst1g03156 478 Pfam BRCA1-associated protein 2 53 148 IPR011422 -
Arst1g03156 478 MobiDBLite consensus disorder prediction 444 478 - -
Arst1g03156 478 ProSiteProfiles Zinc finger UBP-type profile. 196 291 IPR001607 GO:0008270
Arst1g03156 478 FunFam Zinc finger (Ubiquitin-hydrolase) domain-containing protein 184 292 - -
Arst1g03156 478 SUPERFAMILY RING/U-box 178 277 - -
Arst1g03156 478 PANTHER BRCA1-ASSOCIATED PROTEIN 28 477 - -
Arst1g03156 478 Coils Coil 367 408 - -
Arst1g03156 478 CDD RING-H2_BRAP2 160 203 IPR047243 -
Arst1g03156 478 MobiDBLite consensus disorder prediction 1 31 - -
Arst1g03156 478 SMART Zf_UBP_1 212 261 IPR001607 GO:0008270
Arst1g03156 478 Pfam Zn-finger in ubiquitin-hydrolases and other protein 198 273 IPR001607 GO:0008270
Arst1g03156 478 ProSiteProfiles Zinc finger RING-type profile. 162 202 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03156 Arst-Chr1 93090545 93095066 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g03156 146 248 C3H Transcription Factor Family AT2G39100 28.155 7.01e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03156 K10632 - gmx:100807397 735.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g03156 1 93090545 93095066 Arst1g03156 1 93090545 93095066 ECH