Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03150 ATGGATAAATGGGATCTTGAACTCGGTCTTGCTCTCCCAAGCAATTCTCCTTGTGCAGGCTCTAATGATGATATGGAGGAGGAAGAGGTTACACATCCCACTCTGTGTCTCCTTCCGTTAACCCCTGGCCACTCATGGAGGAAGAAACGGCATAGGATGTACGTGAAGGTGAAGATGGAAGGTGTAGGGATTGCAAGAAAGGTTGACCTCACCATGCACCATTCATTTCACACCCTTAACCATGCCTTGCTCCACATGTTTGGAAAACCCCCTCATCAATTCTCAAACTCCTATCGCCTCCTTTTTCAGGACCAACAAGGCCATTGGCTTCTCGCCAAAGATGTCCCATGGAGAACTTTCCTTAACTCTGCGCAGCGTCTCAAACTGCTCCGAACCACCACCACCATCGTACGAAATTAA 420 0.4833 MDKWDLELGLALPSNSPCAGSNDDMEEEEVTHPTLCLLPLTPGHSWRKKRHRMYVKVKMEGVGIARKVDLTMHHSFHTLNHALLHMFGKPPHQFSNSYRLLFQDQQGHWLLAKDVPWRTFLNSAQRLKLLRTTTTIVRN 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03150 139 SUPERFAMILY CAD & PB1 domains 50 128 - -
Arst1g03150 139 Gene3D - 47 136 - -
Arst1g03150 139 ProSiteProfiles PB1 domain profile. 52 134 IPR000270 GO:0005515
Arst1g03150 139 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 44 134 IPR003311 GO:0005634|GO:0006355
Arst1g03150 139 Pfam AUX/IAA family 49 89 IPR033389 -
Arst1g03150 139 Pfam AUX/IAA family 96 134 IPR033389 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g03150 8 127 B3 DNA Binding Superfamily AT3G61830 30.645 4.62e-12 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Arst1g03150 AUX_IAA 4.1e-08 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03150 K14484 - aip:107640278 271.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g03150 1 93041407 93042005 Arst1g03150 1 93041407 93042005 ECH