Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03097 ATGGGGAAGAAAAAGAAGCAAGTAGGAGAAACAAGTGAAGATGGTGGAAATCAAGGTGAGGATCAAGGGCAAGTGGGAGAGAGCAGCAGCACCAACGAATATGAGAGTGATCCGGCCTCATCTATATCCATGTCTCAGGAGTTGAAGGATGAGGGGAACAAACTGTTCCAAAGGAGGGACCTTAGAGGGGCATTGGTGAAATATGAGAAAGCTCTCAAATTGTTACCAAGGAATCATGCAGATGTGTCATATCTGAGGAGTAACATGGCTGCATGCTACATGCAGATGGGACGCAGCCAGTACCCGAGGGCGATTCGCGAATGCGATTTGGCTCTTGAGGTAACACCAAGATATAGCAAAGCTCTGTTGAAGAGGGCAAGGTGTTATGAGGCTTTAAATAGGCTGGATTTAGCTCTGAAGGATGTTAATGCTGTTGTGGAGACGGATCCAAATAATGCCACGGCGTTGGAGATCTCGGAAAAGGTGAAAATTGCACTTGAGAAGAAAGGGTTAAGAGTAAATGGTTCAGTAATTGAATTGCCTCCAGACTATGTTGAACCGATTAATGTTGTGCCGCAAGAAAACGTGGTGAAAGAGAAGGGGCGCAAGAAAAAGAGCAATAAACAGGAGGAGAAGGCTCCTGATAACAAAATTGTAGAAAAGCAAGACAAGAAGGAATCTGCAGAGGATAAGGCTGATGACATTGTTGTTGAGAAGAAGACAAACAAATCCAAAAAGAAGAAGGCTAAGGACAAAATTGAGGAGAAGAAGGATGACATTAAGGAGGTTATAGAGGTGAAGAGTAATGATAGAACAGATGATCTACCCAAGAAAGCAGTAAAATTTGTTTTTGGCGAGGATATAAGATGCGCTCAACTACCTGCTCATTGCAGCTTCTTGCAGCTAAGAGAAACTATTTATGATCGGTTCCCAGGCCTAGGACCCATTCTTGTCAAATACAGGGACCATGAAGGTGATTTGGTTACAATCACTTGTGATGATGAGTTAAGATGGGCTGAAACAGGATCCGAGAGTTCTATCCGGTTGTATATAATAGCAGCTGCTCCTGAGCAGGATCAATTCTTTGAAAGGCTCAAAGTAAAGGTGGGGAAAAAGGCTGTTGTGGTTGATGTACCTGATGAAAGTTGTGAGGTAAAACCAAAGAAAATTGTTGGCTCATCTTGCATTGAGGATTGGATAGTTCAATTTGCCAAGCTATTCAAGAACCATCTTGGATTTGAATCTGACAGATATCCGGATTTTCATGACCTTGGGATGAAATTCTATTCCGAGGCTTTGGAGGAGACTGTTACATGTAATGAAGCACAAGACTTATTTAACATGGCAGGAGATAAGTTCCAAGAGATGAGTGCTCTAGCATTGTTCCACTGGGGAAATGTGCTTGCATCAAGGGCAAGGAAGAAAGTATATTTAACAGATGATTTTTCTAAACAGAACATATGCGAACGAATCATGAGCTGTTATGAATGGGCAAAGGGTGAATTTTCTGATGCGGGAGAAAAATATGTAGCTGCCATTCAAATCAAGCCGGATTTTTATGAAGCATTCCTAGCACTAGGGCAGCAGCAGTTTGAGCAAGCAAAACTTTCTTGGTATCATGCTCTCAGTAGTAATGTCGATCTACAAACATGGTCATCCACCGAGGTTCTTCAGCTTTACAACGATGCTGAGGATAATATAGAGAAAGGAATGCAGATATTTGAAGCATCAGGGGGGAAGAAATACTTGAGTAAAGCCTTTAGTTCAAAGAATGCAAGAAGACATCTACAATACATGGGGTTGCATGTACTTGCCAAAAATATATCCTCAGAGGAAGTTGCTACACAGCAGGCAAATATGAAAGCTCTAATTAATCTTCTATGGGGTACCATGCTATATGAACGCTCCATTGTAGAATTCAAAATAGGTTCACCATCATGGAATGAAACACTGGGAGTAGCAGCTGAGAAGTTTGAACTTGCTGGAGCTTCTTCATCGGATATATCTTCGACGTTGAAGGATCACTGTTCAAATAATGCTGCAGCAGATGGTCCAGGATTCAACATTGAAATAATAGTACAGGCATGGAGTGATATAAATGAAACTAAAAGGTGGAAGCGTGTAATTCCTTCATTTCGTTTGGAGCCCTTGCTTAGAAGGCGAGCTTCAAACCTTGATCAGGCATCTGAGCTTCCATGA 2199 0.4193 MGKKKKQVGETSEDGGNQGEDQGQVGESSSTNEYESDPASSISMSQELKDEGNKLFQRRDLRGALVKYEKALKLLPRNHADVSYLRSNMAACYMQMGRSQYPRAIRECDLALEVTPRYSKALLKRARCYEALNRLDLALKDVNAVVETDPNNATALEISEKVKIALEKKGLRVNGSVIELPPDYVEPINVVPQENVVKEKGRKKKSNKQEEKAPDNKIVEKQDKKESAEDKADDIVVEKKTNKSKKKKAKDKIEEKKDDIKEVIEVKSNDRTDDLPKKAVKFVFGEDIRCAQLPAHCSFLQLRETIYDRFPGLGPILVKYRDHEGDLVTITCDDELRWAETGSESSIRLYIIAAAPEQDQFFERLKVKVGKKAVVVDVPDESCEVKPKKIVGSSCIEDWIVQFAKLFKNHLGFESDRYPDFHDLGMKFYSEALEETVTCNEAQDLFNMAGDKFQEMSALALFHWGNVLASRARKKVYLTDDFSKQNICERIMSCYEWAKGEFSDAGEKYVAAIQIKPDFYEAFLALGQQQFEQAKLSWYHALSSNVDLQTWSSTEVLQLYNDAEDNIEKGMQIFEASGGKKYLSKAFSSKNARRHLQYMGLHVLAKNISSEEVATQQANMKALINLLWGTMLYERSIVEFKIGSPSWNETLGVAAEKFELAGASSSDISSTLKDHCSNNAAADGPGFNIEIIVQAWSDINETKRWKRVIPSFRLEPLLRRRASNLDQASELP 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03097 732 Gene3D Tetratricopeptide repeat domain 42 172 IPR011990 GO:0005515
Arst1g03097 732 SUPERFAMILY CAD & PB1 domains 278 346 - -
Arst1g03097 732 PANTHER PROTEIN CLMP1 2 730 IPR044517 -
Arst1g03097 732 Coils Coil 218 270 - -
Arst1g03097 732 ProSiteProfiles TPR repeat profile. 119 152 IPR019734 GO:0005515
Arst1g03097 732 ProSiteProfiles TPR repeat profile. 45 78 IPR019734 GO:0005515
Arst1g03097 732 Pfam PB1 domain 279 344 IPR000270 GO:0005515
Arst1g03097 732 Gene3D - 277 357 - -
Arst1g03097 732 CDD PB1 280 351 - -
Arst1g03097 732 SMART PB1_new 277 354 IPR000270 GO:0005515
Arst1g03097 732 SMART tpr_5 45 78 IPR019734 GO:0005515
Arst1g03097 732 SMART tpr_5 83 118 IPR019734 GO:0005515
Arst1g03097 732 SMART tpr_5 119 152 IPR019734 GO:0005515
Arst1g03097 732 MobiDBLite consensus disorder prediction 1 48 - -
Arst1g03097 732 MobiDBLite consensus disorder prediction 12 48 - -
Arst1g03097 732 SUPERFAMILY TPR-like 45 163 IPR011990 GO:0005515
Arst1g03097 732 MobiDBLite consensus disorder prediction 197 232 - -
Arst1g03097 732 ProSiteProfiles PB1 domain profile. 277 354 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03097 Arst-Chr1 92494575 92498135 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g03097 15 152 Calmodulin-binding Proteins AT3G25230 29.448 6.66e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03097 K26538 - gmx:100778972 916.761
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g03097 1 92494575 92498135 Arst1g03097 1 92494575 92498135 ECH