LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst1g03088	ATGAAAAATAAAAACATTGTAGCAATTGAATTGGATTTGGATTTGGATGGCAATAATGGCTTCTTCTCCTCTTCATCGACTACAATTCCCAGTTCATCTCTTGTTATGGACATGGAGGGTCAGGCAATAGAAAAGGACTATTTTGCATGCCCAATATGTTATGAACCACTCATAAGAAAAGGTCCCTCTGGCCTTAACTTATCAGCAATATACAGATCAGGTTTCAAGTGTAAAAGATGCAGAAAATCATTCTCTAGTAAAGATAAGTATCTTGATTTGACGGTTACTTCTGGATTATTGGACTACACTGAAAACCAACCATATCTCACTGAGCTTTTCAGGAGTCCATTTGTTTCATTTTTGTACGAAAGAGGTTGGCGTCAGAATTTCAATCTAGGAGGCTTTCCAGGTCCTGAAGAAGAGTTCAAAATGGCTCAAGACTACTTTCAATCTGCTAAAGGTGGCTGCATCGTCGATGTTAGCTGTGGAACTGGCTTGATTTCGCGAAAATTCGCCAAATCTGGATCATATTCTGGAGTGGTGGCGCTGGATTTTTCTGAAAACATGCTTCGCCAGTGTTATGATTTCATTAACAAAGATGACATTCTTTTGAAAGCTAATCTTGCTCTTGTAAGAGCAGATGTTTGTAGGCTTCCTTTCTCATCTGGTTCTGTTGATGCCGTCCACGCCGGCGCCGCCTTGCATTGTTGGCCATCTCCCTCCAATTCTGTTGCTGAAATTAGCCGGATACTAAGAAGTGGTGGAATCTTTGTTGGAACCACTTTTCTCCGTTACTCTTCTACAACCCCATTAATTGTGCGCTTATTCAGAGAGAGTGTTTCAAGGACACATAAATTCTTAACAGAGCAAGAAATTGAAGGGCTTTGCATGTCATGTGGTCTCATCAATTACACAAGCAAAGTTCATCAGTCCTTTATCATCTTCTCTGCTCAGAAGCCTTAG	963	0.406	MKNKNIVAIELDLDLDGNNGFFSSSSTTIPSSSLVMDMEGQAIEKDYFACPICYEPLIRKGPSGLNLSAIYRSGFKCKRCRKSFSSKDKYLDLTVTSGLLDYTENQPYLTELFRSPFVSFLYERGWRQNFNLGGFPGPEEEFKMAQDYFQSAKGGCIVDVSCGTGLISRKFAKSGSYSGVVALDFSENMLRQCYDFINKDDILLKANLALVRADVCRLPFSSGSVDAVHAGAALHCWPSPSNSVAEISRILRSGGIFVGTTFLRYSSTTPLIVRLFRESVSRTHKFLTEQEIEGLCMSCGLINYTSKVHQSFIIFSAQKP	320

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst1g03088	320	Pfam	Methyltransferase domain	158	258	IPR013216	GO:0008168
	Arst1g03088	320	PANTHER	METHYLTRANSFERASE	74	303	-	-
	Arst1g03088	320	CDD	AdoMet_MTases	157	263	-	-
	Arst1g03088	320	FunFam	Putative methyltransferase, chloroplastic	113	319	-	-
	Arst1g03088	320	Gene3D	Vaccinia Virus protein VP39	112	319	IPR029063	-
	Arst1g03088	320	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	122	320	IPR029063	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst1g03088	Arst-Chr1	92422644	92424239	Dispersed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	C2H2	Arst1g03088		Methyltransf_11	1.3e-19	CL0063

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst1g03088	-		-	aip:107615380	557.37