Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03084 ATGATTTTGGGAAGCAACTCCCATTCATGGCAGGGGCTCTTCCCTTATATCATAATTTCGTCATCTGAGTTCAACCCTGGCAGTATGCAGTGTTGCGTGGTCTTGTGGAGAATGGGAAGTACTGGTACTGACAAGATGCCAGGCAATAACAGCACAGGAAGTTCAGAAACCACTATTGAGATAAAGATCAAGACCTTGGATTCACAGACTTACACCCTCAGAGTGGATAAACAGATGCCAGTCCCTGCTCTGAAAGAACGGATTGCTTCTGTCACTGGAGTGTTATCACATCGGCAGCGCTTAATTTGCCAAGGAAAGGTTCTGAAGGACGATCAACTCCTGTCTGCTTACCATGTTGAAGATGGTCATACCTTGCATCTGGTTTCTAGGCAACCTGATCTACCAGGATTTTTGCCCGGTCATTCAGGGGCTGACCCAAATTCAAGCACAAGTCATGGCCACAGTAGTCAAATATCCCCGGGTGTAGTCATTGAACTCTTTATTGAAACCAAGAAGTTTTACTTAGTGTTTCAAGCTCATATAAGCATATGTCTCTATTTATCTGATGAACTATGACATAACATTGGGGTGCTGGCTTGGATGAAGGAGCATGACTCCCAAGGCTTTGGAAGAACTTCAGGTTCCAGTGGTCTTTCAGATTCATCCCATCCTCAGCCTGAACAAACTGGTTTGCGGTATTCATCAGATAGGTCGCGTAATACCTTTGTACATCCAGCAGCAGCTTCTTTGGGATCTTTGCAGCCTCCTGTTATTCCCGATTCTTTGACAACACTATCCCAATTTCTGAGTCATATAAGTCACGAATTTGATGCAATTGTCAGAGAAGGGGGCAATAATGTCCAAGCAGCTGAGGCTCATAGGAATGAAGAAATGGGGTCTGCTTCGTCACGATTGGGTTCAACAGCAGAAGCACTTACATCACCTGCATCCTTGGCAGAAGTCATGCTATCTACCAGACGAATGATGATTGAACAAGCTGGGGAATGCCTACTTCAACTTGCAAGACACCTGGAGAATCAGGCAAATGTAACTGATCATTTGATGCGGTCAAGCATTCAGTCTAGGGCTTTGAGGACTGGAGTTCTGTTCTATAACCTGGGTGCATTATTCCTTGAGCTTGGCCGCACAACCATGACATTGCGCTTGGGTCAAAGTCCGTCTGAAGCTGTAGTTAATGGTGGGCCTGCAGTTTTCATATCTCCGTCTGGTCCTAACCATATCATGGTTCAGCCTCTTCCTTTTCAACCTGGAGCGAACTTTGGTACTGTCCCCATAGGAACTGCTCAGTCTAACGCAAGTTTAGGTAGTGGACTTGGTTCAAGTTTTTTCCCAAGGCGGATTGATATACAGATACGACGAGGGGTCTCAACAGCCACACCAAATGCCAGTCAAGAAGAACGTGCTGATACACAGTCTGCTTCAGTACAAAGAAATCAAGGTGAAGGTCCTGCTAATCAGGCAGCCTCAAGGCGTTCAGATGTGGCTGGTGCTGGGGAGCAAGGAGTAAGGATTGTGCCAATTAGAACCATGGTTGCAACAGTACCAGGTTCCTTAGGTCGTCCACCTGCAGAACCATCTGGTAATTCTATAGGGGTTTACTATCCGGTTCTCGGGAGATTTCAACAGGTATCTTCAGGGCATGGAAATAGTGAACAAGGATCTCAACCAGCTAGTCAGCATCATGCTGTGCAACAGTCCAGTCATGAAAACACATTGCAAAGGCAAAACGAAGATTCTGCAAGGAATGGATCCTCATCAACTCCTACCACAAGCTCGAATTCCCGTGTGGTGAATATCAATATCCTGGCAGCTGGTGGGGCCCAGAATAATCAGGAGTCTGAGCGACAGATACCAAACAGTGTTCTTCAGTTTATAAGGACCCTGTTTCCTGGGGGAGAAATTCATGTTGAAGACTTGAATTTACAGGGAACAAATTCAGGTTCTACCCCAGAGCAAGCTGCAACAGCAAGGGCAGCTCAGGCCCCTGAAGCTGAACCTAGAGTTAGTGATGAAGGAAGGTTTTTGTCAAACATACTCCGCGAAATCATTCCCCTCGTGTCTCAACAAACAGGCTCTGGAAGAAATCCTTCAGAGGAACAAGCAGCTCAGGATTCTTCATCACAGGTGGAAACTGATGCAGGGACATCACGAAGGCGGAATGGTTCAGATCCAAGCCCCCCTGATTCTAAACGCCAAAAGATGGAGTGA 2229 0.4634 MILGSNSHSWQGLFPYIIISSSEFNPGSMQCCVVLWRMGSTGTDKMPGNNSTGSSETTIEIKIKTLDSQTYTLRVDKQMPVPALKERIASVTGVLSHRQRLICQGKVLKDDQLLSAYHVEDGHTLHLVSRQPDLPGFLPGHSGADPNSSTSHGHSSQISPGVVIELFIETKKFYLVFQAHISICLYLSDELXHNIXGVLAWMKEHDSQGFGRTSGSSGLSDSSHPQPEQTGLRYSSDRSRNTFVHPAAASLGSLQPPVIPDSLTTLSQFLSHISHEFDAIVREGGNNVQAAEAHRNEEMGSASSRLGSTAEALTSPASLAEVMLSTRRMMIEQAGECLLQLARHLENQANVTDHLMRSSIQSRALRTGVLFYNLGALFLELGRTTMTLRLGQSPSEAVVNGGPAVFISPSGPNHIMVQPLPFQPGANFGTVPIGTAQSNASLGSGLGSSFFPRRIDIQIRRGVSTATPNASQEERADTQSASVQRNQGEGPANQAASRRSDVAGAGEQGVRIVPIRTMVATVPGSLGRPPAEPSGNSIGVYYPVLGRFQQVSSGHGNSEQGSQPASQHHAVQQSSHENTLQRQNEDSARNGSSSTPTTSSNSRVVNINILAAGGAQNNQESERQIPNSVLQFIRTLFPGGEIHVEDLNLQGTNSGSTPEQAATARAAQAPEAEPRVSDEGRFLSNILREIIPLVSQQTGSGRNPSEEQAAQDSSSQVETDAGTSRRRNGSDPSPPDSKRQKME 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03084 743 Pfam Ubiquitin family 61 131 IPR000626 GO:0005515
Arst1g03084 743 MobiDBLite consensus disorder prediction 461 508 - -
Arst1g03084 743 MobiDBLite consensus disorder prediction 694 743 - -
Arst1g03084 743 SUPERFAMILY Ubiquitin-like 54 132 IPR029071 -
Arst1g03084 743 MobiDBLite consensus disorder prediction 462 494 - -
Arst1g03084 743 MobiDBLite consensus disorder prediction 134 156 - -
Arst1g03084 743 MobiDBLite consensus disorder prediction 694 730 - -
Arst1g03084 743 Gene3D - 52 136 - -
Arst1g03084 743 SMART ubq_7 59 130 IPR000626 GO:0005515
Arst1g03084 743 FunFam Large proline-rich protein BAG6 51 142 - -
Arst1g03084 743 CDD Ubl_ubiquitin_like 61 128 - -
Arst1g03084 743 ProSiteProfiles Ubiquitin domain profile. 59 134 IPR000626 GO:0005515
Arst1g03084 743 MobiDBLite consensus disorder prediction 551 605 - -
Arst1g03084 743 PRINTS Ubiquitin signature 111 132 IPR019956 -
Arst1g03084 743 PRINTS Ubiquitin signature 69 89 IPR019956 -
Arst1g03084 743 PRINTS Ubiquitin signature 90 110 IPR019956 -
Arst1g03084 743 PANTHER LARGE PROLINE-RICH PROTEIN BAG6 46 739 - -
Arst1g03084 743 MobiDBLite consensus disorder prediction 210 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03084 Arst-Chr1 92371619 92378467 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g03084 59 130 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 37.500 3.66e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03084 K23390 - gmx:100783070 919.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g03084 1 92371619 92378467 Arst1g03084 1 92371619 92378467 ECH