Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03083 ATGGCTGAACAAGGAAACCGTTTCTGGAAATCCATTGGCCTTGGATTTAAGACTCCCAGGGATGCCATTGAAGGAACCTATATTGACAAGAAATGCCCCTTTACCGGAACTGTTTCCATCCGTGGCCGAATCTTAGCTGGAACTTGTCACAGTGCTAAGATGAATAGGACTATCATTGTTAGGAGGAATTATCTTCATTTTATCAAGAAGTATCAGAGATACGAGAAAAGACATTCGAATATTCCTGCACATATATCACCCTGCTTCCGTGTGAAGGAAGGAGATCATGTTATTATTGGCCAATGCAGGCCACTTTCAAAGACGGTGAGGTTCAATGTGTTGAAAGTGATCCCAGCTGGATCTTCAAGTGGTGCAAAGAAGGCATTTGCTGGAATTTGA 399 0.4261 MAEQTEKAFLKQPKVFLCSKKSGKGKRPGKGGNRFWKSIGLGFKTPRDAIEGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAKKAFAGI 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03083 159 Gene3D - 1 158 - -
Arst1g03083 159 Pfam Ribosomal protein S17 74 142 IPR000266 GO:0003735|GO:0005840|GO:0006412
Arst1g03083 159 NCBIfam 30S ribosomal protein S17 55 143 IPR028333 -
Arst1g03083 159 PRINTS Ribosomal protein S17 family signature 88 111 IPR000266 GO:0003735|GO:0005840|GO:0006412
Arst1g03083 159 PRINTS Ribosomal protein S17 family signature 131 138 IPR000266 GO:0003735|GO:0005840|GO:0006412
Arst1g03083 159 PRINTS Ribosomal protein S17 family signature 121 131 IPR000266 GO:0003735|GO:0005840|GO:0006412
Arst1g03083 159 PANTHER 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER 10 150 IPR000266 GO:0003735|GO:0005840|GO:0006412
Arst1g03083 159 SUPERFAMILY Nucleic acid-binding proteins 68 147 IPR012340 -
Arst1g03083 159 FunFam 40S ribosomal protein S11 1 158 - -
Arst1g03083 159 Pfam Ribosomal_S17 N-terminal 4 72 IPR032440 -
Arst1g03083 159 ProSitePatterns Ribosomal protein S17 signature. 121 133 IPR019979 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03083 Arst-Chr1 92368278 92369850 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g03083 1 159 Cytoplasmic Ribosomal Protein Gene Family AT5G23740 89.937 7.30e-98 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03083 K02949 - rcu:8266659 285.804