Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03082 ATGACTGCAGCAGCCACCATGTGTGTTGAGGAAGCTGAGCAAGTTGAGCATCATGATCATCAAGATATGGAGAATACTAAGAAGGAAGACATGATTCATAACAAAAAGTGGCCTTTGCATTGTGATAATCATAATCTCTTGATGGACACCACCTCTTCTTTTGCATCTTCCACTGCAAACTCACTCCCTCTGGAAAGCATATGTGAGGAGACAGTGATTGCAGACAAGAAACAGAACGGTTCAAGCTTTGTCCCGGCTCTGCGCTCCGGCGAATGGTCTGATATCGGAGGCCGGCCTTACATGGAAGATACACACATATGCATTGGAGACATGGCAAAAAGATTTGGATATAATAACAACCTACTTTCTGAGGAAGCTGTTTCATTTTATGGTGTATTTGATGGACATGGAGGGAAGAGCGCGGCTCAATTCGTGCGCGATCATCTGCCTAGGATCATTGTTGAGGATGCAGGCTTTCCTTTGGAACTTGAGAAGGTTGTTACAAAGTCTTTTTTGGACACTGATGCAGAGCTTAAAACATACTCTCTTGAATCTTGCCTCTCTTCTGGAACCACTGCACTCACTGCAATTATATTCGGAAGGTCATTGCTTGTAGCCAATGCAGGGGACTGCAGGGCTGTGTTGTCGCGCCATGGCGCGGCAATAGAAATGTCCAAGGATCACAGGCCTTACTGCATCAAAGAGAGAAATCGAATCGAGTCCCTAGGTGGATTCATTGATGATGGCTACCTGAATGGTCAGTTAGGTGTTACTCGTGCTCTAGGCGACTGGCATCTTGAAGGAATGAAGGACACTGGTGGAGGTGGTGGACCATTGAGTGCTGAGCCTGAACTCAAATTGATGACATTGACCAAAGAAGATGAATTCTTGATAATAGCAAGTGATGGAATTTGGGATGTTTTCCGGAGCCAAAATGCTGTGGATTATGCTCGGAGGAGGCTTCAAGAACACAATGATGTGAAGCAATGTTGCAAGCAAATAGTAGAGGAAGCAATAAAGAGAGGAGCAACAGATAACTTAACGGTTGTGATGGTGTGTTTTCACTCAGATCCACCACCCCCTGTGGTTGTGGAAAGAGCAAGAGTTAGAAGAAGCATATCTGCTGAGGGACTGCATAACCTCAAATGCCTGCTACAAGGTTAG 1164 0.4527 MTAAATMCVEEAEQVEHHDHQDMENTKKEDMIHNKKWPLHCDNHNLLMDTTSSFASSTANSLPLESICEETVIADKKQNGSSFVPALRSGEWSDIGGRPYMEDTHICIGDMAKRFGYNNNLLSEEAVSFYGVFDGHGGKSAAQFVRDHLPRIIVEDAGFPLELEKVVTKSFLDTDAELKTYSLESCLSSGTTALTAIIFGRSLLVANAGDCRAVLSRHGAAIEMSKDHRPYCIKERNRIESLGGFIDDGYLNGQLGVTRALGDWHLEGMKDTGGGGGPLSAEPELKLMTLTKEDEFLIIASDGIWDVFRSQNAVDYARRRLQEHNDVKQCCKQIVEEAIKRGATDNLTVVMVCFHSDPPPPVVVERARVRRSISAEGLHNLKCLLQG 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03082 387 SUPERFAMILY PP2C-like 80 355 IPR036457 -
Arst1g03082 387 MobiDBLite consensus disorder prediction 11 25 - -
Arst1g03082 387 CDD PP2Cc 88 354 IPR001932 -
Arst1g03082 387 Pfam Protein phosphatase 2C 100 346 IPR001932 -
Arst1g03082 387 Gene3D - 68 357 IPR036457 -
Arst1g03082 387 SMART PP2C_4 78 352 IPR001932 -
Arst1g03082 387 Coils Coil 378 387 - -
Arst1g03082 387 PANTHER PROTEIN PHOSPHATASE 2C 75 352 IPR015655 GO:0004722|GO:0006470
Arst1g03082 387 MobiDBLite consensus disorder prediction 1 25 - -
Arst1g03082 387 FunFam Probable protein phosphatase 2C 22 71 357 - -
Arst1g03082 387 ProSiteProfiles PPM-type phosphatase domain profile. 88 354 IPR001932 -
Arst1g03082 387 ProSitePatterns PPM-type phosphatase domain signature. 129 137 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03082 Arst-Chr1 92358043 92359982 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g03082 48 387 PP2C-type Phosphatase Gene Family AT2G25620 56.941 3.86e-132 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Arst1g03082 PP2C 4.2e-69 CL0238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03082 K14803 - gmx:100782648 556.599