Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03076 ATGATAAGAATTGAAGGAGAGAATTGCCCTAGTGCGGTTGTGGAATGGTACCAATGTTCTGCGTCAAAGGATCAAAGACACTATTTTGACCTGAGCTTGAAGGCGAAGAAACACCTCGTTTCGTTGGGTTGGACCTTTTCTTATTGCGACAAGAAAACTCGCTGGGAACTTCGTTACAAATCCCCTTCTGGTAAGACCTATGTTTCTCTCAGAACTGCATGCAAAGCCTGCATTGAAGAGAAAAAGAAAGATTCTTCATCTAGTTCCAATTCATTGCAAGGATCACAGCAATCTCAATCCCAATCTCTACCTGCTGCATCACCAACGAGTTCCAAGGTAACCGGTGGTAGGCCTCGGAAACGCAAGAAACCGAGTGACGATGAAGATTGGACTCTTCCGGAGACGCAAGTATCCAATTTAGTAAGTCCTCGTTCTGGTTCTCGTGCACGTGGCGGTGGCGGTGGCCGTCGTCGTCGTGATTCTGGTGAAAGTCCTAATGCCGCAAGAAAAGTAAGGAGGGCACGGAGTTCTTCTGATAATCCAAGAACGATTCTTTCTTGGCTGATTGACAACAATGTGGTGGCGCAGGAGGCGTGGGTTTTCTGCCGTGGAGGGAAAGATAATGAATTGGTGAAGAGAGGGAAGCTGTTTCGTTCTGGTATTGTCTGCCATTGTTGTGATTCTTTATGCACACTCTCTCAATTCCAGGGTCATGCCGGTTGCAAAGGTCAACCTCCCTCTGCTAGTATCTTCTTGGAACAAGATAAAAGGTCTTTGTTGGATTGCCAGAAACAAGCATTGATGATGATCAAGGCTAACAACAATGGGGATAATGATCATCATCATGAAAATGATTCCATTTGTTCAATTTGTCTCCAGGGGGGTTTCATTCTTCTCTGTGATCGCTGTCCGGCGTCATTCCACGCCGAATGTATTGGCCTTGATCATGTTCCCCCTGGTGATTGGTTCTGCCCTTCATGCTCTTGCAGAATTTGCAACCGTCCCAAATGCATAGAAGATTCTTGTAGAGAGGAAAGTCATTTGGCTAATAATTTTATAGCTTGTTATCAGTGTCAACGCAGATTCCACATTGGATGTTTAGCTTCTAGAGGCTTTGCTTTTCTGAACATGGAAACCGATTGGTTTTGCAATGAAGATTGTCAGAAGATATTTTTGACACTGAATAACATGTTGGGAAAACCAATTCCTGTGGGTGATGGTAATCTAACTTGGACATTGTTGACGAGCCTCAAGAAAAGCACTAATGACAATGATGACGATGGAACCATTACTGAAATGGAGAGCAAGCTAAATGTCGCACTTGGAATAATTCATGAGTGTTTTGAGCCCATCATAGATCCTGTATTTGGAAGAGACATTGCTGCAGATATTATGTTCAGCAGATATTCATGGCTGCCACGTATGAACTTTACAGGGTTCTACACTGTGATTCTAGAGAGGAATGATGAGGTGATCTCTGTTGCAAACACAAGGATTTATGGCCAAAAGGTTGCAGAAGTGCCGCTTGTCGCGACGAGTGAGCAGTATCGAAAGCAGGGAATGTGTCGAATTCTGATGGATCAGCTTGAGAAGCTGTTGGATAAGTTGGGTGTTGAGAGGTTGCTATTGCCTGCTGCTCCTTATTTAGTAGAAACTTGGACAAACTCATTTGGATTTGCAAAAATGACACACTCAGATCAGTATTACTGTGTAGGTTATCCTCTTGCAAATTTTCCAGACACAACATTGTGCCACAAATCATTGAAGCAACCTTTGATGCTGTATTGA 1788 0.4362 MIRIEGENCPSAVVEWYQCSASKDQRHYFDLSLKAKKHLVSLGWTFSYCDKKTRWELRYKSPSGKTYVSLRTACKACIEEKKKDSSSSSNSLQGSQQSQSQSLPAASPTSSKVTGGRPRKRKKPSDDEDWTLPETQVSNLVSPRSGSRARGGGGGRRRRDSGESPNAARKVRRARSSSDNPRTILSWLIDNNVVAQEAWVFCRGGKDNELVKRGKLFRSGIVCHCCDSLCTLSQFQGHAGCKGQPPSASIFLEQDKRSLLDCQKQALMMIKANNNGDNDHHHENDSICSICLQGGFILLCDRCPASFHAECIGLDHVPPGDWFCPSCSCRICNRPKCIEDSCREESHLANNFIACYQCQRRFHIGCLASRGFAFLNMETDWFCNEDCQKIFLTLNNMLGKPIPVGDGNLTWTLLTSLKKSTNDNDDDGTITEMESKLNVALGIIHECFEPIIDPVFGRDIAADIMFSRYSWLPRMNFTGFYTVILERNDEVISVANTRIYGQKVAEVPLVATSEQYRKQGMCRILMDQLEKLLDKLGVERLLLPAAPYLVETWTNSFGFAKMTHSDQYYCVGYPLANFPDTTLCHKSLKQPLMLY 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03076 595 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 428 580 IPR000182 GO:0016747
Arst1g03076 595 Pfam Tify domain binding domain 214 266 IPR032308 -
Arst1g03076 595 ProSiteProfiles Zinc finger PHD-type profile. 285 330 IPR019787 -
Arst1g03076 595 MobiDBLite consensus disorder prediction 87 114 - -
Arst1g03076 595 Pfam Acetyltransferase (GNAT) domain 477 562 IPR000182 GO:0016747
Arst1g03076 595 SUPERFAMILY FYVE/PHD zinc finger 263 329 IPR011011 -
Arst1g03076 595 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 464 576 IPR016181 -
Arst1g03076 595 CDD NAT_SF 483 543 - -
Arst1g03076 595 MobiDBLite consensus disorder prediction 153 177 - -
Arst1g03076 595 Gene3D - 466 575 - -
Arst1g03076 595 PANTHER PHD FINGER PROTEIN 12 12 590 IPR042163 GO:0003714|GO:0045892
Arst1g03076 595 SMART PHD_3 287 328 IPR001965 -
Arst1g03076 595 SMART PHD_3 329 388 IPR001965 -
Arst1g03076 595 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 276 329 IPR013083 -
Arst1g03076 595 MobiDBLite consensus disorder prediction 131 145 - -
Arst1g03076 595 MobiDBLite consensus disorder prediction 84 179 - -
Arst1g03076 595 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 330 390 IPR013083 -
Arst1g03076 595 Pfam PHD-finger 287 329 IPR019787 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03076 Arst-Chr1 92303205 92304992 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g03076 164 536 PHD Transcription Factor Family AT5G58610 43.264 3.80e-92 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Arst1g03076 Acetyltransf_1 0.0001 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03076 - - aip:107608518 1054.28