LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst1g03058	ATGCTGCAAAATAGTCCTTCAAAATTTGAAATTAGTCTCTCCTTTAAAATAGGTGAAGGATTAATCACTGAAAAATATGGTTCTGGCCTATCAAACCCATTGTATCTTAAGCCTCCAGATAATACTGAATGGAGAGTAGATTGGACTAATCATGATGGTAGAACTTTGTTTAAAAAGGGTTGGAAAGAGTTTGTTGCATATTACTCTCTTGATCCTGCCCATTTGTTATGGTTTGAGTATAATATTGGAACTTCTCACATTGAAGTACACATATTTGATATGAGTTGCCTCCAAATATATTATCTTGCCAATGATCAGATCAAAGAGCAGCTGCCATGCAGTGGTCAACAGCCGATGAGAAGGCCAGAAGAACCAAAAACTAGAGATGTGGATAGCAGTCCCAATACCCAAAACATGACACTTAACGAGGGACGGCAAAAGAAAAGATTGAATGAACCATTGACAAGAGAAGTCCGGGGCCAACCAAGGAAAAAACTGAGAGCACTAGTGTCATCTGCTTTCAAAGGTAGACAGTTGAAAAATGACACACAAATCAAGGATGTGGAAAGAAGCTTCAATTCGCACGGTATTAAATCCAAAGAAAAAAACTATGAGATGCCAGTGTCTGTCAATCAAGATTCTAATGTGGTAGTTTCTGATTCTTTGTTTCCTATGTATAAGGCAAAAGGAATAGAAGAAGAAAAGATTCTGAATCTCCTGTTCGGCCCTGTCCTACAAGACTTGAATCTCTGA	753	0.3811	MLQNSPSKFEISLSFKIGEGLITEKYGSGLSNPLYLKPPDNTEWRVDWTNHDGRTLFKKGWKEFVAYYSLDPAHLLWFEYNIGTSHIEVHIFDMSCLQIYYLANDQIKEQLPCSGQQPMRRPEEPKTRDVDSSPNTQNMTLNEGRQKKRLNEPLTREVRGQPRKKLRALVSSAFKGRQLKNDTQIKDVERSFNSHGIKSKEKNYEMPVSVNQDSNVVVSDSLFPMYKAKGIEEEKILNLLFGPVLQDLNL	250

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst1g03058	250	CDD	B3_DNA	30	93	IPR003340	GO:0003677
	Arst1g03058	250	Gene3D	-	4	96	IPR015300	-
	Arst1g03058	250	MobiDBLite	consensus disorder prediction	113	148	-	-
	Arst1g03058	250	SUPERFAMILY	DNA-binding pseudobarrel domain	24	95	IPR015300	-
	Arst1g03058	250	PANTHER	B3 DOMAIN-CONTAINING	24	178	-	-
	Arst1g03058	250	ProSiteProfiles	B3 DNA-binding domain profile.	1	95	IPR003340	GO:0003677

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst1g03058	Arst-Chr1	92075177	92076024	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst1g03058	22	101	B3 DNA Binding Superfamily	AT3G18990	37.500	3.24e-09	54.7

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst1g03058	-		-	adu:107460526	508.064