Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03019 ATGGGAGATAGACGGAGTGAGGGTTCAGCGTCGACGCTGCTGCAGGGGAAGTATGAGTTAGGGAGGCTTCTTGGAACGGGGACGTTCGCGAAGGTGTACCACGCGCGTGAAAAGGTTGGGATGATGGAGCAGATTAAGAGAGAGATCTCGGTGATGAAGATGATGAAGCATCCTCATATCGTTGCGCTCCACGAAGTAATGGCTTCCAAATCCAAGATCTACATCGCCATGGAGCTCGTCCGGGGCGGCGAGCTCTTCAACAAAATTGCCACAAGGGGACGCATGAGGGAGGACCTTGCGAGGCTCTACTTCCACCAGCTTATCTCCGCCGTCGATTTCTGCCACAGCCGTGGCGTCTACCACCGCGATCTCAAGCCGGAGAATCTCCTCCTTGACCACAACGGCAACCTCAAGGTCTCTGACTTCGGACTCAGCACTTTCTCCGAGCATCTCCGCCAGGACGGCTTGTTGCACACAACTTGCGGCACTCCGGCATACGTCTCGCCGGAGGTGCTCGCGCGGAAGGGATACGACGGCGCCAAGGCCGATATATGGTCCTGCGGCGTCATCCTGTTTGTGCTTCTTGCAGGTTGCTTGCCTTTTCAGGACGATAACCTTGTTGCGATGTACAAGAAGATTTACAGAGGAGATTTCAGGTGTCCGCCGTGGTTCTCCGGCGATGCAAGGAGGCTCATCACCAAGCTGCTCGATCCGAACCCGAATTCTCGCATCACCATTTCGAAAATCATGGAGTCACCGTGGTTCAAGAAACCTGTTCCGAAGAACATGCTACGGGGGATGAAGGAGGAAGACGAAGAGGAGAAGGAGAAAGAGATAGAGGAGAAGATGAAGCAGCCATCGACGATGAACGCGTTTCACATAATATCGTTATCCGAAGGGTTTGATTTGTCGAGGTTGTTCGAGGAGAAGAAGAGGGAGGAGAGGGAGGAGATGAGGTTTGCGACGGCGGGGACGGCGAGCAGCGTGATATCTCGACTGGAGGAGGTGGCGAAGGCGGTGAAGTTCGACGTGAAGAGGAACAGCGATGAGACGAAGGTGAGGCTGCAGGGGCAGCAGAGAGGAAGGAAGGGGAAGCTGGCAATTGCGGCGGATATATACGCCGTGACGCCGTCATTCCTGGTGGTGGAGGTGAAGAAGGATAACGGTGACACTTTGGAGTACAACCAGTTCTGCAGCAAGGAGCTTCGCCCTGCACTCAAGGATATCTTCTGGACTTCCCCACCTGAGAATACCACACCTGCTTAA 1266 0.5466 MGDRRSEGSASTLLQGKYELGRLLGTGTFAKVYHARDXKVGMMEQIKREISVMKMMKHPHIVALHEVMASKSKIYIAMELVRGGELFNKIATRGRMREDLARLYFHQLISAVDFCHSRGVYHRDLKPENLLLDHNGNLKVSDFGLSTFSEHLRQDGLLHTTCGTPAYVSPEVLARKGYDGAKADIWSCGVILFVLLAGCLPFQDDNLVAMYKKIYRGDFRCPPWFSGDARRLITKLLDPNPNSRITISKIMESPWFKKPVPKNMLRGMKEEDEEEKEKEIEEKMKQPSTMNAFHIISLSEGFDLSRLFEEKKREEREEMRFATAGTASSVISRLEEVAKAVKFDVKRNSDETKVRLQGQQRGRKGKLAIAADIYAVTPSFLVVEVKKDNGDTLEYNQFCSKELRPALKDIFWTSPPENTTPA 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03019 422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 120 132 IPR008271 GO:0004672|GO:0006468
Arst1g03019 422 ProSiteProfiles NAF domain profile. 285 309 IPR018451 GO:0007165
Arst1g03019 422 CDD CIPK_C 291 408 - -
Arst1g03019 422 SMART serkin_6 18 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g03019 422 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 10 409 - -
Arst1g03019 422 ProSiteProfiles Protein kinase domain profile. 18 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g03019 422 ProSitePatterns Protein kinases ATP-binding region signature. 24 54 IPR017441 GO:0005524
Arst1g03019 422 Gene3D Transferase(Phosphotransferase) domain 1 86 261 - -
Arst1g03019 422 Pfam Protein kinase domain 31 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g03019 422 Coils Coil 262 282 - -
Arst1g03019 422 Gene3D Kinase associated domain 1, KA1 284 413 - -
Arst1g03019 422 SUPERFAMILY Protein kinase-like (PK-like) 15 264 IPR011009 -
Arst1g03019 422 Gene3D Phosphorylase Kinase; domain 1 20 85 - -
Arst1g03019 422 FunFam Non-specific serine/threonine protein kinase 285 412 - -
Arst1g03019 422 FunFam Non-specific serine/threonine protein kinase 81 263 - -
Arst1g03019 422 Pfam NAF domain 287 346 IPR004041 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03019 Arst-Chr1 91852825 91854754 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g03019 8 416 CBL-interacting serine-threonine protein kinases AT4G30960 69.070 0.0 599
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Arst1g03019 Pkinase 4.9e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03019 - K07198 gmx:547644 650.588