Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03013 ATGGGTTTGGGAGTGATTGGCACTGTTCTAATTTTGGGACTCTTGTTCAAGCATTTGGCTTCTCAGCAACCAAACACTGATGAGTTCTATGTGTCTGAGTTCTTGAAGAAAATGGTTTCCAATTCTTCTTCTTTTTCCTCCTACAATTTCTCAGCTTCAGTGTGTTCATGGCAAGGAGTTTTCTGTGACAACAACAAAGAACATGTTGTTGAGTTAAACTTTTCAGGTTTAGGCCTCTCTGGAACTATTCCTGATAACACCATAGGCAAGCTGAGCAAGCTTCAAACTTTGGATCTTAGCTGCAACAAGATCACAACTTTGCCTTCAGATTTTTGGAGTTTAAGCTCTATCAAGAGCCTCAACCTCTCCACCAATCAGATTTCAGGTTCATTGACCAACAACATTGGCAACTTTGGTATGCTTGAAACCATTGACTTGTCAAGCAACAACTTCACTGAAGAAATACCAGAAGCTATTGGATCCCTTATGAGTTTGAGAATCCTCAAACTTGACCATAACAAATTCTCAAGAAGCATTCCTTCTGGGATTCTCAAGTGCCAGTCCCTGGTTTCAATTGATCTCTCATCAAATCAATTGAATGGAACACTTCCAAATGGTTTTGGTGCTGCTTTTCCCAAGCTCAAGAACTTGAACCTTGCTGCCAATGATATAGATGGCCGAATCTTGGATATTTCAGGTTTCAATTCCATTTTAAGTCTCAATATATCTGGAAATTCCTTTCAGGGTTCTATCATGGGTGTGTTTCAGGAAAAGTTGGAGGTATTGGACCTAAGCAGAAACCAATTTCAAGGCCACATTTCACAGGTACAATACTACAACTGGTCTCATTTGGTTTATCTTGATTTGTCAGGGAATCAGCTAAGTGGTGAAATTTTCCAGAACTTGTTGAGTTTGAGTGAGTCCTTGTTGAATCTAAAGCACCTCAATCTTGCACACAACAGATTCTCCAAACAGAAATTCCCAACAAAGATTGAAAAGCTCCAAGGATTGGAGTATCTGAACTTGTCCAAAACCAATCTTGTAGGCCTAATCCCTGATGAAATCTCAAAACTGAGTAATCTCAATGTTCTTGATCTTTCTATGAATCATCTTGCTGGTAAAGTTCCAATTTTGAGGAACAAACACCTCCAAATTCTTGACCTTTCAAACAACACCTTGAGTGGAACAATCCCTTTGTCTGTCTTGGGGAAACTACCATTCATGGAGAGATACAACTTCTCTTACAATAACTTAACACTGTGTGCTTCAGACATTCACCCTGATGTTCTTGAATCAGCATTCTTTGGATCAGTGAACAGTTGTCCAATTGCTGCAGACCCACATTTCTTCAGGAGAAAGAACAATGGACACAACAAGGGAATGAAGCTAGCATTGGTGTTAACCTTCTCAATGATCTTCATGCTTGCTGGCCTGTTGTTCTTAGCATTCGGCTGCCGAAGGAAATCGAAAATGTGGCAAGTTAAACAAACTTCATACAAAGAAGAACAGAACATTTCCGGGCCTTTCTCATTCCAGACTGATTCAACAACCTGGGTGGCTGATGTTAAGCAGGCAACATCAGTTCCGGTCGTAATCTTTGAGAAGCCTTTGTTGAACATTACATTTGCAGACTTACTGGCTGCAACTTCAAATTTCGACCGAGGTACTCTTTTGGCCGAAGGAAAATTCGGTCCGGTCTATAGAGGCTTTCTTCCTGGTGGTATTCATGTGGCAGTTAAAGTTTTGGTGGTTGGTTCTACATTGACAGATCAAGAAGTGGCTAGAGAGCTTGAGTTTCTTGGCAGAATCAAGCATCCCAATCTTGTTCCTTTAACTGGATATTGTGTAGCAGGGGATCAGAGGATTGCTATATATGATTACATGGAGAATGGAAACCTGCAAAATCTGCTATATGACTTGCCACTTGGTGTGCAAAGCACTGATGATTGGAGCACAGATACATGGGATGAATCTGACAACAATGGAATTCAGAATGCTGGCTCTGAAGGATTGCTCACAACTTGGAGATTTCGTCACAAAATCGCCCTTGGAACCGCTCGAGCTCTCGCTTTCTTGCACCATGGATGCTCTCCTCCAATCATTCATAGAGCAGTCAAGGCCAGCAGTGTTTATTTGGACTATGATCTCGAGCCCAGGCTGTCTGATTTCGGCCTGGCTAAGATCTTTGGAAGCGGCTTGGACGAGGAGATTGCTCTTGGTTCCTCTGGTTATGTTCCGCCGGAGTTTTCCCAACAAGAATTCGAGTCACCAACCACGAAATCTGATGTATATTGTTATGGAGTTGTGCTCTTTGAGCTAGTAACCGGAAAGAAGCCGGCCGGAGATGCTTACCCTGATGACAAGGAATCAACTTTGGTTAGCTGGGTGAGAGGACTAGTTAGAAAGAATCAAGCTTCAATAGCAATTGATCCAAAGATTAGGGACACAGGAGTAGATGAACAAATGGAGGAGGCTCTCAAGATTGGTTATCTTTGCACTGCTGACTTGCCGGCCAAGCGACCAACAATGCAGCAGATTGTTGGACTTCTAAAAGACATTGAACCTATTGCTTCTAATTAG 2580 0.4198 MGLGVIGTVLILGLLFKHLASQQPNTDEFYVSEFLKKMVSNSSSFSSYNFSASVCSWQGVFCDNNKEHVVELNFSGLGLSGTIPDNTIGKLSKLQTLDLSCNKITTLPSDFWSLSSIKSLNLSTNQISGSLTNNIGNFGMLETIDLSSNNFTEEIPEAIGSLMSLRILKLDHNKFSRSIPSGILKCQSLVSIDLSSNQLNGTLPNGFGAAFPKLKNLNLAANDIDGRILDISGFNSILSLNISGNSFQGSIMGVFQEKLEVLDLSRNQFQGHISQVQYYNWSHLVYLDLSGNQLSGEIFQNLLSLSESLLNLKHLNLAHNRFSKQKFPTKIEKLQGLEYLNLSKTNLVGLIPDEISKLSNLNVLDLSMNHLAGKVPILRNKHLQILDLSNNTLSGTIPLSVLGKLPFMERYNFSYNNLTLCASDIHPDVLESAFFGSVNSCPIAADPHFFRRKNNGHNKGMKLALVLTFSMIFMLAGLLFLAFGCRRKSKMWQVKQTSYKEEQNISGPFSFQTDSTTWVADVKQATSVPVVIFEKPLLNITFADLLAATSNFDRGTLLAEGKFGPVYRGFLPGGIHVAVKVLVVGSTLTDQEVARELEFLGRIKHPNLVPLTGYCVAGDQRIAIYDYMENGNLQNLLYDLPLGVQSTDDWSTDTWDESDNNGIQNAGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRAVKASSVYLDYDLEPRLSDFGLAKIFGSGLDEEIALGSSGYVPPEFSQQEFESPTTKSDVYCYGVVLFELVTGKKPAGDAYPDDKESTLVSWVRGLVRKNQASIAIDPKIRDTGVDEQMEEALKIGYLCTADLPAKRPTMQQIVGLLKDIEPIASN 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03013 859 FunFam Calmodulin-binding receptor kinase CaMRLK 257 377 - -
Arst1g03013 859 Pfam Leucine rich repeat 239 294 IPR001611 GO:0005515
Arst1g03013 859 Pfam Leucine rich repeat 82 127 IPR001611 GO:0005515
Arst1g03013 859 Gene3D Ribonuclease Inhibitor 180 255 IPR032675 -
Arst1g03013 859 Gene3D Ribonuclease Inhibitor 256 325 IPR032675 -
Arst1g03013 859 FunFam Putative LRR receptor-like serine/threonine-protein kinase 513 627 - -
Arst1g03013 859 SMART LRR_sd22_2 309 336 - -
Arst1g03013 859 SMART LRR_sd22_2 380 401 - -
Arst1g03013 859 SMART LRR_sd22_2 281 304 - -
Arst1g03013 859 SMART LRR_sd22_2 186 219 - -
Arst1g03013 859 SMART LRR_sd22_2 91 122 - -
Arst1g03013 859 SUPERFAMILY Protein kinase-like (PK-like) 529 850 IPR011009 -
Arst1g03013 859 Gene3D Phosphorylase Kinase; domain 1 512 627 - -
Arst1g03013 859 FunFam Nuclear pore complex protein NUP107 26 181 - -
Arst1g03013 859 SMART LRR_typ_2 91 113 IPR003591 -
Arst1g03013 859 SMART LRR_typ_2 309 334 IPR003591 -
Arst1g03013 859 SMART LRR_typ_2 358 380 IPR003591 -
Arst1g03013 859 SMART LRR_typ_2 162 186 IPR003591 -
Arst1g03013 859 SMART LRR_typ_2 114 138 IPR003591 -
Arst1g03013 859 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 160 251 IPR046959 -
Arst1g03013 859 Gene3D Transferase(Phosphotransferase) domain 1 628 858 - -
Arst1g03013 859 ProSiteProfiles Protein kinase domain profile. 552 857 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g03013 859 Gene3D Ribonuclease Inhibitor 326 428 IPR032675 -
Arst1g03013 859 Gene3D Ribonuclease Inhibitor 26 179 IPR032675 -
Arst1g03013 859 PRINTS Leucine-rich repeat signature 358 371 - -
Arst1g03013 859 PRINTS Leucine-rich repeat signature 284 297 - -
Arst1g03013 859 SUPERFAMILY L domain-like 49 424 - -
Arst1g03013 859 Pfam Protein tyrosine and serine/threonine kinase 556 848 IPR001245 GO:0004672|GO:0006468
Arst1g03013 859 Pfam Leucine Rich repeat 380 395 IPR001611 GO:0005515
Arst1g03013 859 ProSiteProfiles Leucine-rich repeat profile. 93 114 IPR001611 GO:0005515
Arst1g03013 859 ProSiteProfiles Leucine-rich repeat profile. 382 403 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03013 Arst-Chr1 91722254 91725832 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g03013 79 853 Receptor kinase-like Gene Family AT5G07280 32.692 6.16e-111 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Arst1g03013 PK_Tyr_Ser-Thr 2.7e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03013 - - adu:107459185 1654.42