Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03008 ATGGCTGAGCAACCAAGCTCCGCCGAAGCTGTCACGGAGGGAGCGCCGGAGCTTCTCCCGAAAGAGAAGGATTCAGAAGGCGGCGAAGGTGGAAACGAACAAGGACAACAAGGGAAGGCATCAGAGGGAGAAGAACGAGCTAGCGAATCGCCTTGCGAAACTGATAAACCTCCGAAGAGTTCTGATAAACCTCCGAAGGGGTCGAATTCGGGAACCCTAGCTGCTGAATCACCTGTTGTGAACAATCGGAGTGATGCAGAATTGCAGGGGAGCCCTGCTACGCCGAATATGGATGTCAAAGCTGAAAGTAAGGAGACAGATGGACCTCGTGAAAAGGAAACTATTGCAAGTGAAGCAGTACAACCACCTCCAACTCAGATAGAAAATCAGCCACAGGTGTCTGCATGTTCAACTCCATTGTCAGAACTGTCACCAACCTCTGTTACACAATCTTTATCATCTGTTCCTAGTCAAATTGCCCCCAAACAGAAAATGCCACCTTTGAAGATTAATAATGTTCATGTGCCACAATTGGACAAAAAAATTCCTTCTGGTGGCAAACATGTTTCTTGTGGTTCTGTTGCAAGGGTTTCAGTTTCTGATGGTTACAGCTGGCGGAAGTATGGTCAGAAGCAAGTGAAGAGTCCCACGGGGTCTCGAAGCTATTACAGGTGTACTCATTCAGAATGTGCTGCAAAGAAGATTGAATGCAATGATGATGCGGGTCGTGTAATAGATGTTGTTTATAAAAGTCAACACAGTCATGATCCCCCACATAAGCCTAATTCTACAAGGGAAAGTAAGTTAGTGTCTTCCAGTGAACCTCCTAATGTAGAAAACAAAGTTTCTCAGCAGCTATCTATCAGAGGTCTGAAAAACTCTGATCCGTCTCCTTCAAAAGAAACCTTACAAGATGCACCTCGCACTGCTGACAAGAAAAGACCAAACTCATCTAATCTCAGTGACAATGGTAAAGTTATTTTGAAGGAGGAGCATGTTAATGAGCCAGAGCCAAAAAAAAGAATGAAGAAAGATGACTTAGCAGACTTGGATTCCCCTGTAAAATCTGGAAAGAAATCGAGGTTTGTTGTACATGCAGAAGGGGATGTAGGTATATCAGGTGATGGATACCGATGGCGCAAGTATGGACAGAAAATGGTGAAGGGGAATCCACATCCGAGAAACTACTACAGATGCACTTCTGCTGGGTGTCCTGTCCGAAAACACATTGAGACTGCTGTTGATAACTCGAACGCTGTCATCATAACATACAAGGGTGTACATGACCATGACATGCCTGTGCCAAAGAAACGACATGGCCCACCCAGTGCTCCTCTTGTGGCTGCTGCAGCTCCGGCATCCATGAACAATTCGCAGTCAAAGAAGAAACCTGATTCTCCTAAAAAACAGAACAAGTCTACTCAATGGTCGGTGGACACTGAAGGAGAACTAAGCGGGGAAGCCATGGATCTTGGAGGTGAAAAGGCAATGGAGTCAGCTCGCACACTTCTGAGCATAGGATTCGAAATTAAGCCATGCTGA 1542 0.4565 MAEQPSSAEAVTEGAPELLPKEKDSEGGEGGNEQGQQGKASEGEERASESPCETDKPPKSSDKPPKGSNSGTLAAESPVVNNRSDAELQGSPATPNMDVKAESKETDGPREKETIASEAVQPPPTQIENQPQVSACSTPLSELSPTSVTQSLSSVPSQIAPKQKMPPLKINNVHVPQLDKKIPSGGKHVSCGSVARVSVSDGYSWRKYGQKQVKSPTGSRSYYRCTHSECAAKKIECNDDAGRVIDVVYKSQHSHDPPHKPNSTRESKLVSSSEPPNVENKVSQQLSIRGLKNSDPSPSKETLQDAPRTADKKRPNSSNLSDNGKVILKEEHVNEPEPKKRMKKDDLADLDSPVKSGKKSRFVVHAEGDVGISGDGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIETAVDNSNAVIITYKGVHDHDMPVPKKRHGPPSAPLVAAAAPASMNNSQSKKKPDSPKKQNKSTQWSVDTEGELSGEAMDLGGEKAMESARTLLSIGFEIKPC 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03008 513 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 102 464 IPR044810 GO:0003700
Arst1g03008 513 ProSiteProfiles WRKY domain profile. 368 433 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst1g03008 513 ProSiteProfiles WRKY domain profile. 200 258 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst1g03008 513 MobiDBLite consensus disorder prediction 264 304 - -
Arst1g03008 513 Pfam WRKY DNA -binding domain 375 430 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst1g03008 513 Pfam WRKY DNA -binding domain 201 255 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst1g03008 513 Gene3D WRKY domain 188 259 IPR036576 GO:0003700|GO:0006355|GO:0043565
Arst1g03008 513 Gene3D WRKY domain 357 434 IPR036576 GO:0003700|GO:0006355|GO:0043565
Arst1g03008 513 SUPERFAMILY WRKY DNA-binding domain 197 258 IPR036576 GO:0003700|GO:0006355|GO:0043565
Arst1g03008 513 MobiDBLite consensus disorder prediction 249 263 - -
Arst1g03008 513 MobiDBLite consensus disorder prediction 249 354 - -
Arst1g03008 513 FunFam WRKY transcription factor 359 434 - -
Arst1g03008 513 MobiDBLite consensus disorder prediction 325 354 - -
Arst1g03008 513 SUPERFAMILY WRKY DNA-binding domain 369 433 IPR036576 GO:0003700|GO:0006355|GO:0043565
Arst1g03008 513 MobiDBLite consensus disorder prediction 39 62 - -
Arst1g03008 513 MobiDBLite consensus disorder prediction 430 493 - -
Arst1g03008 513 MobiDBLite consensus disorder prediction 119 160 - -
Arst1g03008 513 SMART WRKY_cls 373 432 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst1g03008 513 SMART WRKY_cls 199 257 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst1g03008 513 MobiDBLite consensus disorder prediction 100 114 - -
Arst1g03008 513 MobiDBLite consensus disorder prediction 63 91 - -
Arst1g03008 513 MobiDBLite consensus disorder prediction 1 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03008 Arst-Chr1 91699408 91703487 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g03008 89 513 WRKY Transcription Factor Family AT4G30935 51.402 5.42e-131 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Arst1g03008 WRKY 1.7e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03008 - - gmx:100782194 629.402