Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03005 ATGGAAAAGTTAAGACACTCTCATCAACGATCACACGGCTGCCTCCATGCAGGATCGTTCCAACGCAGCTGCCCTCCCATCTACGATCACGGCGCCGCCCTCTCATCTGCACACAACACAGCCGGTGTTCACTCTTTCAGAATGGCAGAATCGCAAGAAGAACGTGCTGCAAGTGAGGGTCCTCATTTATGCACATCACCTAGCCGAAATTCATTAATGGAGGTTGATATAGTTGAACCGTTAGTTTGTGTTGCCTCTGAAGTTTCTGAAAATTTATCAAACGAACAAGAAAACTTAGCCGCCAATGTCGCAGAGCATGGTCACAAGTCAAACAAGTTGTCGGATGTTATGGATGTTGGAAGTGAAGAGATGGAGCCTGGTGATGAGTTACTAGATCATGGTAACCTACAAGAAGATGAGATACCAAGAGTTGGAATGCGATTTCCTCAGCTACAGATGGCGCATGACTTTTATGTGTCCTATGCAAAGAAAGCTGGATTTGCAACTAAGATAAGGACGACAACATTTGACAAGATCACAAAGGCTCCCATTAACCAGGCTATACACTGTAATCGCGATGGGATCCGCGAGTCTCGTGTTAAAGCACCAACACGGAAGAATACGATTTCAGCTGCTGGGTGCAAGGCAAGGATATATCTCAAGTTTGATAAAGACATGCAAGATTGGGTTTTGTTCAAGGTTAACTTGACACACTCACACTCCTTTTCAGTGAGAAAGGCAGTGCACCATGAGTATAGGCAGCTGACCATACACGCGAAGTGCGTGATTAAGGATAACGATGAGGCTGTGATTCGACCAAATAAGACATTTCTTGCTTTGGCAAATGAGGGTGGAGGCCCCTCTAACTTGGGATACTTAGAGAAGGATTTAGGAAACTATATAACAGCAAGGCTCCGAAGTAGCAACGTTAATGCGGATGTCAGGGAGATGATGAGCTACTTTAGGAGAATGAAGGACATCAATCCGAACTTCTTTTACGCGGTGAAGTTGGACGATGAGTGTAAATTTAAGAGTGCAGTATGGGTTGATGCAAGGTGTAGGGCGTCGTATGAATACTATGGAGACGTCGTGTCAGTTGATAGCACGTACAATAGAAATAGGCATGGATTACCGTTTGTGTCGTTCGTTGGGGTCAACCACCATGGTAGGTCGACCCTCCTCGGTTGTGCTTTGTTGGGGAATGAAGAAATCGGAAGTTATGAGTGGGTTTTTCTCCAATGGGTGAAGTGCATGGGAACTGCTCCAAAGTGTATCATAACCGATCAATGTCGATCCCTTTACCGTGCGATCAAAAATACTTTACCCGACACACGCCACCGGTGGTGCATTTGGCATATTATGAATAAGCTACCTTCGAAGCTTGGGGGTTACCGCCGGTACGGAGCTTTGTATGGTGACCTAAACGACATTGTGTGGAACTCTCGGACGGAGGAGTCATTTGAAGATGATTGGGCTGATTTTATAGATGAGTACAACTTACATAACAACACATGGCTGTCAGGTTTAATCTGTATGATGACCGACGCATGTGGGTCCCAATATACTTCAAGGGTGAATTTTGGACAGGAATGCGGAGTACGCAAAGGAGTGAGAGCATGCACGCATTCTACGGTGGATACTTACACAAGGGAACTGGAGGATGATGCTGCAGACTCGAGGGGGGTTATCCCTTGTGCAACTACCTCGCCTATAGAGAAACAGTTTCAGCAAGAGTATACCACGAGCATTTTTAGGGATGTTCAAATTGAGTTTGTGAGGAAGGCTAACTGCAGAGTTTCTGCAGTTGATGAACAGGGTCCAGTGGTCTGCGTGAAGGTGGAAGAGGAGAAACTACTCAACGATACTATTCTATGCGTTCCGTATGATGTTCACTTTGACCGTTCCACACATGAGCTTCGTTGTGAATGCAATCTTTTTGAGAGTTCAGGTGTGTTATGCTGTCACTGCCTTGAAGTTTTCCATTCGTATAAAGTGTACAAAGTACCGTCCTGTTATATTCTTCCTCGATGGAGCAAGAAGATAAAGTGCAAGCATACGTATGTCAAAAGTAGCCATGATGTCAGTCGGTCAGATGAGAGTCATGTTGCATTTAGGAAACTGTGTGCACACTTCTATAATGTTGCTCAAGAGTTCCTCGGTGATGATGAAGAAACAGCATTGCTGCATGTTGCCTTGGAAGAAACAAGGGCCAAGTTGGCTACGCACCGTGCCAAAAAGAGGTCCGAGAGAATGGCAGAGACTCAGACCAACATTGGCTCTCAGAGTTCGAATGATGTCGGTGTTGATGACATCCAAGGCCCATCGAAGGTCACCACAAAGGGCAGGCCAAAGAGTAAGAGGCTTGGCTCTGCCCTTGAGAAGTCCATCAAGAATTCAAGACGGAGAAAACAAAAGAATTCACATCCGGTGGTTCGTCCGCACACATTTCAAGATATAAACCATTGTGATGTTTCTAGCCTGGATGTTCCCAAACAAGACGGTGGTTTCATACTGGATGTTCATTTTAGTAAGTTATTGGATGTTCAGATTAGCTATATTGGCGGATGGAAAAAAAATGTCATGGAATCAAGTCTTTCTAATGTGAAAAATAACAAAGCACTAAGCATGTCAACAGTAAGTAAACTCAGTATAACAAAGTAG 2661 0.4476 MEKLRHSHQRSHGCLHAGSFQRSCPPIYDHGAALSSAHNTAGVHSFRMAESQEERAASEGPHLCTSPSRNSLMEVDIVEPLVCVASEVSENLSNEQENLAANVAEHGHKSNKLSDVMDVGSEEMEPGDELLDHGNLQEDEIPRVGMRFPQLQMAHDFYVSYAKKAGFATKIRTTTFDKITKAPINQAIHCNRDGIRESRVKAPTRKNTISAAGCKARIYLKFDKDMQDWVLFKVNLTHSHSFSVRKAVHHEYRQLTIHAKCVIKDNDEAVIRPNKTFLALANEGGGPSNLGYLEKDLGNYITARLRSSNVNADVREMMSYFRRMKDINPNFFYAVKLDDECKFKSAVWVDARCRASYEYYGDVVSVDSTYNRNRHGLPFVSFVGVNHHGRSTLLGCALLGNEEIGSYEWVFLQWVKCMGTAPKCIITDQCRSLYRAIKNTLPDTRHRWCIWHIMNKLPSKLGGYRRYGALYGDLNDIVWNSRTEESFEDDWADFIDEYNLHNNTWLSGLICMMTDACGSQYTSRVNFGQECGVRKGVRACTHSTVDTYTRELEDDAADSRGVIPCATTSPIEKQFQQEYTTSIFRDVQIEFVRKANCRVSAVDEQGPVVCVKVEEEKLLNDTILCVPYDVHFDRSTHELRCECNLFESSGVLCCHCLEVFHSYKVYKVPSCYILPRWSKKIKCKHTYVKSSHDVSRSDESHVAFRKLCAHFYNVAQEFLGDDEETALLHVALEETRAKLATHRAKKRSERMAETQTNIGSQSSNDVGVDDIQGPSKVTTKGRPKSKRLGSALEKSIKNSRRRKQKNSHPVVRPHTFQDINHCDVSSLDVPKQDGGFILDVHFSKLLDVQISYIGGWKKNVMESSLSNVKNNKALSMSTVSKLSITK 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03005 886 ProSiteProfiles Zinc finger SWIM-type profile. 628 664 IPR007527 GO:0008270
Arst1g03005 886 MobiDBLite consensus disorder prediction 742 812 - -
Arst1g03005 886 MobiDBLite consensus disorder prediction 753 769 - -
Arst1g03005 886 Pfam FAR1 DNA-binding domain 156 242 IPR004330 -
Arst1g03005 886 PANTHER OS01G0519700 PROTEIN 139 808 - -
Arst1g03005 886 Pfam MULE transposase domain 363 456 IPR018289 -
Arst1g03005 886 MobiDBLite consensus disorder prediction 48 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03005 Arst-Chr1 91677274 91682257 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Arst1g03005 MULE 9.3e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03005 - - ahf:112778726 1342.41