Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g03004 ATGCAAGATCTTTCCAACGCAGCTGCCCTCTCATCTACGATCGATAGCGCCGCCCTCTCATCTGCACACAACACAGCCGGTGTTCACTCTTTCAGAATGGCAGAATCGCAAGAAGAACGTGCTGCAAGTGAGGGTCCTCATTTATGCACATCACCTAGCCGAAATTCATTAATGGAGGTTGATATAGTTGAACCGTTAGTTTGTGTTGCCTCTGAAGTTTCTGAAAATTTATCAAACGAACAAGAAAACTTAGCCGCCAATGTCGCAGAGCATGGTCACAAGTCAAACAAGTTGTCGGATGTTATGGATGTTGGAAGTGAAGAGATGGAGCCTGGTGATGAGTTACCAGATCATGGTAACCTACAAGAAGATGAGATACCAAGAGTTGGAATGCGATTTCCTCAGCTACAGATGGCGCATGACTTTTATGTGTCCTATGCAAAGAAAGCTGGATTTGCAACTAAGATAAGGACGACAACATTTGACAAGATCACGAAGGCTCCCATTAACCAGGCTATACACTGTAATCGCGATGGTATCCGCGAGTCTCGTGTTAAAGCACCAACGCGGAAGAATACGATTTCAGCTGCTGGGTGCAAGGCAAGGATATATGTAAAGTTTGATAAAGACGTGCAAGACTGGGTTCTGCTCAAGGTTGACTTGACGCACTCTCACCCTTGTTCACCGAAAAAGGCAGTGCACTATCATGAGTATAGGCAGTTGACCATGCATGCGAAGTGCGTGATCGAGGATAATGATGAGACTGGGATTCGACCAAACAAGACATTCCTTGCTTTGTCAAATGAGGCTGGTGGCCCCTCTAACTTGGGATTCTCAGAGAAGGATTTAAGAAACTATATAACAGCAAGGCTCCGAAGTAGCAACGTTAATGCGGATGTCAGGGAGATGATGAGCTACTTTAGGAGAATGAAGGACATCAATCCGAACTTCTTTTACGCGGTGAAGTTGGACGATGAGTGTAAATTTAAGAGTGCAGTATGGGTTGATGCAAGGTGTAGGGCGTCGTATGAATACTATGGAGACGTCGTGTCAGTTGATAGCACGTACAATAGAAATAGGCATGGATTACCGTTTGTGTCGTTCGTTGGGGTCAACCACCATGGTAGGTCGACCCTCCTCGGTTGTGCTTTGTTGGGGAATGAAGAAATCGGAAGTTATGAGTGGGTTTTTCTCCAATGGGTGAAGTGCATGGGAACTGCTCCAAAGTGTATCATAACCGATCAATGTCGATCCCTTTACCGTGCGATCAAAAATACTTTACCCGACACACGCCACCGGTGGTGCATTTGGCATATTATGAATAAGCTACCTTCGAAGCTTGGGGGTTACCGCCGGTACGGAGCTTTGTATGGTGACCTAAACGACATTGTGTGGAACTCTCGGACGGAGGAGTCATTTGAAGATGATTGGGCTGATTTTATAGATGAGTACAACTTACATAACAACACATGGCTGTCAGATCTGTATGATGACCGACGCATGTGGGTCCCAATATACTTCAAGGGTGAATTTTGGACAGGAATGCGGATCAAGGAGCAGAGAGAACTGGAGGATGATGCTGCAGACTCGAGGGGGGTTATCCCTTGTGCAACTACCTCGCCTATAGAGAAACAGTTTCAGCAAGAGTATACCACGAGCATTTTTAGGGATGTTCAAATTGAGTTTGTGAGGAAGGCTAACTGCAGAGTTTCTGCAGTTGATGAACAGGGTCCAGTGGTCTGCGTGAAGGTGAAAGAGGAGAAACTACTCAACGATACTATTCTATGCGTTCCGTATGATGTTCACTTTGACCGTTCCACACATGAGCTTCGTTGTGAATGCAATCTTTTTGAGAGTTCAGGTGTGTTATGCTGTCACTGCCTTGAAGTTTTCCATTCGTATAAAGTGTACAAAGTACCGTCCTGTTATATTCTTCCTCGATGGAGCAAGAAGATAAAGCGCAAGCATACGTATGTCAAAAGTAGCCATGATGTCAGTCGGTCAGATGAGAGTCATGTTGCATTTAGGGAACTGTGTGCACACTTCTATAATGTTGCTCAAGAGTTCCTCGGTGATGATGAAGAAACAGCATTGCTGCATGTTGCCTTGGAAGAAACAAGGGCCAAGTTGGCTACGCACCGTGCCAAAAAGAGGTCCGAGAGAATGGCAGAGACTCAGACCAACATTGGCTCTCAGAGTTCGAATGATGTCGGTGTTGATGACATCCAAGGCCCATCGAAGGTCACCACAAAGGGCAGGCCAAAGAGTAAGAGGCTTGGCTCTGCCCTTGAGAAGTCCATCAAGAATTCAAGACGGAGAAAACAAAAGAATTCACATCCGGTGGTTCGTCCGCACACATTTCAAGATATAAACCATTGTGATGTTTCTAGCCTGGATGTTCCCAAACAAGACGGTGGTTTCATGATTCATGTTAGTTTCAAGGTTCTAAGGCAGCTGTTGCAAAGTATACAGTTTAATAAAGTTGTTTCTGATTTCTACACGCTTGACTATATAGTTTTTCGACTGGATGTTCATTTTAGTAAGTTATTGGATGTTCAGATTAGCTATATTGGCGGATGGAAAAAAAATGTCATGGAATCAAGTCTTTCTAATGTGAAAAATAACAAAGCACTAAGCATGTCAACAGTAAGTAAACTCAGTATAACAAAGTAG 2673 0.4441 MQDLSNAAALSSTIDSAALSSAHNTAGVHSFRMAESQEERAASEGPHLCTSPSRNSLMEVDIVEPLVCVASEVSENLSNEQENLAANVAEHGHKSNKLSDVMDVGSEEMEPGDELPDHGNLQEDEIPRVGMRFPQLQMAHDFYVSYAKKAGFATKIRTTTFDKITKAPINQAIHCNRDGIRESRVKAPTRKNTISAAGCKARIYVKFDKDVQDWVLLKVDLTHSHPCSPKKAVHYHEYRQLTMHAKCVIEDNDETGIRPNKTFLALSNEAGGPSNLGFSEKDLRNYITARLRSSNVNADVREMMSYFRRMKDINPNFFYAVKLDDECKFKSAVWVDARCRASYEYYGDVVSVDSTYNRNRHGLPFVSFVGVNHHGRSTLLGCALLGNEEIGSYEWVFLQWVKCMGTAPKCIITDQCRSLYRAIKNTLPDTRHRWCIWHIMNKLPSKLGGYRRYGALYGDLNDIVWNSRTEESFEDDWADFIDEYNLHNNTWLSDLYDDRRMWVPIYFKGEFWTGMRIKEQRELEDDAADSRGVIPCATTSPIEKQFQQEYTTSIFRDVQIEFVRKANCRVSAVDEQGPVVCVKVKEEKLLNDTILCVPYDVHFDRSTHELRCECNLFESSGVLCCHCLEVFHSYKVYKVPSCYILPRWSKKIKRKHTYVKSSHDVSRSDESHVAFRELCAHFYNVAQEFLGDDEETALLHVALEETRAKLATHRAKKRSERMAETQTNIGSQSSNDVGVDDIQGPSKVTTKGRPKSKRLGSALEKSIKNSRRRKQKNSHPVVRPHTFQDINHCDVSSLDVPKQDGGFMIHVSFKVLRQLLQSIQFNKVVSDFYTLDYIVFRLDVHFSKLLDVQISYIGGWKKNVMESSLSNVKNNKALSMSTVSKLSITK 890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g03004 890 Pfam FAR1 DNA-binding domain 141 228 IPR004330 -
Arst1g03004 890 Pfam MULE transposase domain 349 442 IPR018289 -
Arst1g03004 890 MobiDBLite consensus disorder prediction 33 53 - -
Arst1g03004 890 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 123 706 IPR031052 GO:0006355
Arst1g03004 890 ProSiteProfiles Zinc finger SWIM-type profile. 599 635 IPR007527 GO:0008270
Arst1g03004 890 MobiDBLite consensus disorder prediction 712 781 - -
Arst1g03004 890 MobiDBLite consensus disorder prediction 724 740 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g03004 Arst-Chr1 91652079 91656884 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Arst1g03004 MULE 9.4e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g03004 - - ahf:112778726 1439.48