Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g02996 ATGGTTGCTAACACCACGTTCATAACATTGCAGAAGTTACCAATAAAGTTCACTAAAAAATATGGTTCTGACCTATCAAATCCATTGTATCTTAAGCCTCCAGATGGTACTGAATGGAGCATAGAGTGGATTAATCATGATGGTGAAATTTTGTTTAAAAACGGTTGGAAAGAGTTTGTTGCATATTACTCTCTTGATCATGGCCATTTGTTACGGTTTGGGTACAATATTGGAACATCTCACATGGAAGTACACATATTTGACATGAGTTGCCTCCAAATAGAGTATCCTGCCAATGATCAGATCAAAGAGCAGCTGCCACGCAGGGGTCAGCAGCCGATAGGCAGTTGGAAAATGACACACAAATCAAGGATGTGGAAAGAAGCTTTAATTCTCACTATGAAATTTAACTGGGAAAAGCCCTCATTCATCATCAAGATAACGCAACGGTCTCAAACGAGAGCACCATGTTACTTTTCAACTAAATTCTTCAGAAAGTATTTTATAAATAATCCACAAAATGCAAATATAAGGTTTGGAAAGAAGTTGTTCCCTGTCAAGTTGATCTATAGGCCATCATCATGTGTTGCCTTTATCTCTGCTGGTTGGAACCTTTTTGCTCGAGCTAGTAAATTACAAGCCGGAGATATTTGTTTGTTTAAGCTCATCAATAAAAAAGATCCGATGCTTGATGTTCATATTTGTCGTCGACAACGCCGCGAGTCACTTAAACCAGTGACTCATGGGATTCAACTCTTCAAAGAAGTTAAGGAGCTCAACTCACAGAATCCCTCTTTCATGGTCAAGATAAGAGACAGTAATCCAAGGAGATCAAGGCCTAACTTATCAGCTATCTTCTACAGAAAGTATTTTAAAAAGAATCAGCAGGATGTAAAGTTACAGTTTGGAAAGGAATCGTGGCCTGCTACGATAATCTACAATCCGACATCGAAAAATAGCTTTATTTCGGTTGGTTGGAGTTCTTTTGCCAGAGCAAGTAAATTAGAAGCTGGAGATGTTTGTGTTTTTGAACTCATCAATAAAAAAGATCTATTTGATGTTCATATTTGTAGAACCCAATACTAG 1086 0.3785 MVANTTFITLQKLPIKFTKKYGSDLSNPLYLKPPDGTEWSIEWINHDGEILFKNGWKEFVAYYSLDHGHLLRFGYNIGTSHMEVHIFDMSCLQIEYPANDQIKEQLPRRGQQPIGSWKMTHKSRMWKEALILTMKFNWEKPSFIIKITQRSQTRAPCYFSTKFFRKYFINNPQNANIRFGKKLFPVKLIYRPSSCVAFISAGWNLFARASKLQAGDICLFKLINKKDPMLDVHICRRQRRESLKPVTHGIQLFKEVKELNSQNPSFMVKIRDSNPRRSRPNLSAIFYRKYFKKNQQDVKLQFGKESWPATIIYNPTSKNSFISVGWSSFARASKLEAGDVCVFELINKKDLFDVHICRTQY 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g02996 361 Gene3D - 3 91 IPR015300 -
Arst1g02996 361 SUPERFAMILY DNA-binding pseudobarrel domain 259 358 IPR015300 -
Arst1g02996 361 ProSiteProfiles B3 DNA-binding domain profile. 1 90 IPR003340 GO:0003677
Arst1g02996 361 SUPERFAMILY DNA-binding pseudobarrel domain 12 97 IPR015300 -
Arst1g02996 361 Gene3D - 121 239 IPR015300 -
Arst1g02996 361 Gene3D - 250 361 IPR015300 -
Arst1g02996 361 ProSiteProfiles B3 DNA-binding domain profile. 265 360 IPR003340 GO:0003677
Arst1g02996 361 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 255 359 IPR044837 -
Arst1g02996 361 SMART B3_2 7 90 IPR003340 GO:0003677
Arst1g02996 361 SMART B3_2 266 360 IPR003340 GO:0003677
Arst1g02996 361 SMART B3_2 143 238 IPR003340 GO:0003677
Arst1g02996 361 CDD B3_DNA 264 358 IPR003340 GO:0003677
Arst1g02996 361 ProSiteProfiles B3 DNA-binding domain profile. 184 238 IPR003340 GO:0003677
Arst1g02996 361 Pfam B3 DNA binding domain 155 238 IPR003340 GO:0003677
Arst1g02996 361 Pfam B3 DNA binding domain 12 88 IPR003340 GO:0003677
Arst1g02996 361 Pfam B3 DNA binding domain 277 359 IPR003340 GO:0003677
Arst1g02996 361 SUPERFAMILY DNA-binding pseudobarrel domain 137 237 IPR015300 -
Arst1g02996 361 CDD B3_DNA 141 236 IPR003340 GO:0003677
Arst1g02996 361 CDD B3_DNA 13 88 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g02996 Arst-Chr1 91615388 91617526 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g02996 10 100 B3 DNA Binding Superfamily AT1G49475 38.462 5.95e-12 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Arst1g02996 B3 2.1e-12 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g02996 - - adu:107471893 426.017