Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g02957 ATGCCCGATTTGGGGAATTTGTCTCTTTCCGAGACTCTAGCTCTCCCCACCCCCGCAGACCCTCCTGTCTTAACCAATTCTCTCCACTCAGCCAACCTCAAAAACCTATCGCCACCATCCAACACCGTTGTTTACACGCGCTATGCTCTTCGGCAAGATGGCATTCGCATCCACAAAACTCACGGAACCGAGATTAAGGTTCCTGCCGTCAAAGCAGCTAATGGTGACGCCAAGGGTTTGGAGGATGGAATCAGAGAGTTCTCTCAGAAGAGGAACAAGATTGGCTCCGAGGATCCCGATCTTGAATTCTCACTTCCCTTCCTCGTTGGCGCTTCCAAAATGGTTGAATGCCTTGTTTGCCATCGTCTAGTGTGCCCAGGGGAGGAGCTATGTTGTTCTGTTCGTGGCTGTGGGGGAATCTACCATATCAATTGTGCAAAAGAAACTATGGGGATCTCGAATCCAAAAAAATTCAAGTGCTCACGACATGCATGCTTTGTCTGCAAACAAAAGAAGCAGTTGCGGTGTGTGCGTTGTACAAACGCATTTCATGAAAAATGTGCCCCATGGCCAGAGGCTGTGGTGAGCCTACAGGACAATCCTGGACATGCTATTTGTTGGAGGCATCCTTCTGATTGGCGATTGGATGGGAAGCTTGAAGGTTCCACAAGTGACATACAGGAAGTATTTCGTCGGTTGCCTGTTCCATATGTCAATGAGGATTTCAAGATTGATCTTACATGGAAAGAGATGGAGACTAAGATGGAACCACCATCATATGTGCATATAAGGCGCAATTCCTACTTAGTCAAGAAGCGTAGTGACGAAGATGATGGTGCGGGGTGTACCAGTTGCAGCTCTACCTGTTCGGATGATTGTGTGTGCAGGGTTCAATGCATAAGTTGCTCAAAGTCATGTCGCTGCTCAGAAAATTGCGGTAATAGGCCATTTCGCAAGGAGAAAAAGATTAAGCTGGTCAAGACTGAACATTGTGGATGGGGAGTAGAGGCAGCTGAAACCATCAACAAAGGCGAATTCATAATTGAGTATATTGGAGAAGTCATTGATGATGCTTTATGTGAAAAAAGGCTTTGGGACATGAAATACGGGGGTGCACAGAATTTTTACATGTGTGAGATTCGTAAAGATTTTACTATAGATGCAACCTTCAAAGGAAATATGGCTCGCTTCTTAAACCATGGTTGTGATCCCAACTGTGTTCTCGAGAAGTGGCAAGTAGATGGTGAAACGCGGGTTGGTGTATTTGCTTCCCGTTCAATAGAAACGGGAGATCCCTTAACATATGATTACAGATTTGTGCAATTTGGACCTGAGGTAAAATGTCAATGTGGTGCCCCAAATTGTCGAGGGTTTTTAGGGGTGAAAAAGAAAATTGTGAAGTTAGATATTTGTTGGGGTTGGGGATCAAAGCGTAAGAGAACTTCAGCTGCATGTCCTGCCATAGAAACACATGTATGA 1479 0.4537 MPDLGNLSLSETLALPTPADPPVLTNSLHSANLKNLSPPSNTVVYTRYALRQDGIRIHKTHGTEIKVPAVKAANGDAKGLEDGIREFSQKRNKIGSEDPDLEFSLPFLVGASKMVECLVCHRLVCPGEELCCSVRGCGGIYHINCAKETMGISNPKKFKCSRHACFVCKQKKQLRCVRCTNAFHEKCAPWPEAVVSLQDNPGHAICWRHPSDWRLDGKLEGSTSDIQEVFRRLPVPYVNEDFKIDLTWKEMETKMEPPSYVHIRRNSYLVKKRSDEDDGAGCTSCSSTCSDDCVCRVQCISCSKSCRCSENCGNRPFRKEKKIKLVKTEHCGWGVEAAETINKGEFIIEYIGEVIDDALCEKRLWDMKYGGAQNFYMCEIRKDFTIDATFKGNMARFLNHGCDPNCVLEKWQVDGETRVGVFASRSIETGDPLTYDYRFVQFGPEVKCQCGAPNCRGFLGVKKKIVKLDICWGWGSKRKRTSAACPAIETHV 492
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Arst1g02957 492 ProSiteProfiles Post-SET domain profile. 444 460 IPR003616 -
Arst1g02957 492 SMART PHD_3 116 164 IPR001965 -
Arst1g02957 492 SMART PHD_3 165 210 IPR001965 -
Arst1g02957 492 Pfam SET domain 332 437 IPR001214 GO:0005515
Arst1g02957 492 PANTHER SET DOMAIN PROTEINS 96 480 - -
Arst1g02957 492 Gene3D SET domain 237 469 IPR046341 -
Arst1g02957 492 ProSiteProfiles SET domain profile. 321 438 IPR001214 GO:0005515
Arst1g02957 492 SUPERFAMILY SET domain 241 450 IPR046341 -
Arst1g02957 492 SMART set_7 321 444 IPR001214 GO:0005515
Arst1g02957 492 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 111 212 IPR013083 -
Arst1g02957 492 SMART PostSET_3 444 460 IPR003616 -
Arst1g02957 492 ProSiteProfiles AWS domain profile. 278 321 IPR006560 GO:0005634|GO:0042054
Arst1g02957 492 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 491 IPR025787 -
Arst1g02957 492 FunFam Histone-lysine N-methyltransferase 237 470 - -
Arst1g02957 492 CDD SET_ASHR3-like 322 460 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Arst1g02957 Arst-Chr1 91332770 91337625 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g02957 302 459 C2H2 Transcription Factor Family AT2G23740 37.017 7.99e-24 103
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Arst1g02957 SET 3.7e-17 No_clan
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g02957 - - qsa:O6P43_022233 653.284