Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g02956 ATGCCCGATTTGGGGAATTTGTCTCTTTCCGAGACTCTAGCTCTCCCCACCCCCGCAGACCCTCCTGTCTTAACCAATTCTCTCCACTCAGCCAACCTCAAAAACCTATCGCCACCATCCAACACCGTTGTTTACACGCGCTATGCTCTTCGGCAAGATGGCATTCGCATCCACAAAACTCACGGAACCGAGATTAAGGTTCCTGCCGTCAAAGCAGCTAATGGTGACGCCAAGGGTTTGGAGGATGGAATCAGAGAGTTCTCTCAGAAGAGGAACAAGATTGGCTCCGAGGATCCCGATCTTGAATTCTCACTTCCCTTCCTCGTTGGCGCTTCCAAAATGGTACAATTCAATTTCTTTTCCCTGAAGTCTGTAGATTTTGCTATGAACACTGGGGGGATTAGAATCTACTTCTGTGTATTGGTTCAGGTTGAATGCCTTGTTTGCCATCGTCTAGTGTGCCCAGGGGAGGAGCTATGTTGTTCTGTTCGTGGCTGTGGGGGAATCTACCATATCAATTGTGCAAAAGAAACTATGGGGATCTCGAATCCAAAAAAATTCAAGTGCTCACGACATGCATGCTTTGTCTGCAAACAAAAGAAGCAGTTGCGGTGTGTGCGTTGTACAAACGCATTTCATGAAAAATGTGCCCCATGGCCAGAGGCTGTGGTGAGCCTACAGGACAATCCTGGACATGCTATTTGTTGGAGGCATCCTTCTGATTGGCGATTGGATGGGAAGCTTGAAGGTTCCACAAGTGACATACAGGAAGTATTTCGTCGGTTGCCTGTTCCATATGTCAATGAGGATTTCAAGATTGATCTTACATGGAAAGAGATGGAGACTAAGATGGAACCACCATCATATGTGCATATAAGGCGCAATTCCTACTTAGTCAAGAAGCGTAGTGACGAAGATGATGGTGCGGGGTGTACCAGTTGCAGCTCTACCTGTTCGGATGATTGTGTGTGCAGGGTTCAATGCATAAGTTGCTCAAAGTCATGTCGCTGCTCAGAAAATTGCGGTAATAGGCCATTTCGCAAGGAGAAAAAGATTAAGCTGGTCAAGACTGAACATTGTGGATGGGGAGTAGAGGCAGCTGAAACCATCAACAAAGGCGAATTCATAATTGAGTATATTGGAGAAGTCATTGATGATGCTTTATGTGAAAAAAGGCTTTGGGACATGAAATACGGGGGTGCACAGAATTTTTACATGTGTGAGATTCGTAAAGATTTTACTATAGATGCAACCTTCAAAGGAAATATGGCTCGCTTCTTAAACCATGGTTGTGATCCCAACTGTGTTCTCGAGAAGTGGCAAGTAGATGGTGAAACGCGGGTTGGTGTATTTGCTTCCCGTTCAATAGAAACGGGAGATCCCTTAACATATGATTACAGATTTGTGCAATTTGGACCTGAGGTAAAATGTCAATGTGGTGCCCCAAATTGTCGAGGGTTTTTAGGGGTGAAAAAGAAAATTGTGAAGTTAGATATTTGTTGGGGTTGGGGATCAAAGCGTAAGAGAACTTCAGCTGCATGTCCTGCCATAGAAACACATGTATGA 1566 0.4496 MPDLGNLSLSETLALPTPADPPVLTNSLHSANLKNLSPPSNTVVYTRYALRQDGIRIHKTHGTEIKVPAVKAANGDAKGLEDGIREFSQKRNKIGSEDPDLEFSLPFLVGASKMVQFNFFSLKSVDFAMNTGGIRIYFCVLVQVECLVCHRLVCPGEELCCSVRGCGGIYHINCAKETMGISNPKKFKCSRHACFVCKQKKQLRCVRCTNAFHEKCAPWPEAVVSLQDNPGHAICWRHPSDWRLDGKLEGSTSDIQEVFRRLPVPYVNEDFKIDLTWKEMETKMEPPSYVHIRRNSYLVKKRSDEDDGAGCTSCSSTCSDDCVCRVQCISCSKSCRCSENCGNRPFRKEKKIKLVKTEHCGWGVEAAETINKGEFIIEYIGEVIDDALCEKRLWDMKYGGAQNFYMCEIRKDFTIDATFKGNMARFLNHGCDPNCVLEKWQVDGETRVGVFASRSIETGDPLTYDYRFVQFGPEVKCQCGAPNCRGFLGVKKKIVKLDICWGWGSKRKRTSAACPAIETHV 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g02956 521 FunFam Histone-lysine N-methyltransferase 266 499 - -
Arst1g02956 521 ProSiteProfiles Post-SET domain profile. 473 489 IPR003616 -
Arst1g02956 521 PANTHER SET DOMAIN PROTEINS 130 509 - -
Arst1g02956 521 SMART PostSET_3 473 489 IPR003616 -
Arst1g02956 521 CDD SET_ASHR3-like 351 489 - -
Arst1g02956 521 ProSiteProfiles AWS domain profile. 307 350 IPR006560 GO:0005634|GO:0042054
Arst1g02956 521 SMART set_7 350 473 IPR001214 GO:0005515
Arst1g02956 521 Pfam SET domain 361 466 IPR001214 GO:0005515
Arst1g02956 521 Gene3D SET domain 266 498 IPR046341 -
Arst1g02956 521 SMART PHD_3 194 239 IPR001965 -
Arst1g02956 521 SMART PHD_3 145 193 IPR001965 -
Arst1g02956 521 SUPERFAMILY SET domain 270 479 IPR046341 -
Arst1g02956 521 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 520 IPR025787 -
Arst1g02956 521 ProSiteProfiles SET domain profile. 350 467 IPR001214 GO:0005515
Arst1g02956 521 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 142 241 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g02956 Arst-Chr1 91332762 91337625 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g02956 331 488 C2H2 Transcription Factor Family AT2G23740 35.912 1.02e-23 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Arst1g02956 SET 4e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g02956 - - qsa:O6P43_022233 637.876