Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g02953 ATGCTTGTGCTTGTGAGCTATGTTGAAATCCGTTGTTGCTCTATAGTCATGGCGGTGGTTCTCCTTCTCGTCCTTTTCCTCTCGCGTGCCGCACTCTCTTCATCTGCGGAGCCTCGCAACCACGAAGTGGAGGCTCTAATGAGCATCAAGTGGAGTCTCACTGATCCTCACGGTGTGTTGAGTAACTGGGATGAGTACTCAGTCGACGCTTGCAGCTGGGCCATGATTACTTGCTCCTCTGATTCCCTTGTTATTGGCCTGGGAGCGCCGAGCCAATCTCTCTCTGGAACTTTGTCTGCAGCAATTGGAAACCTAACAAATCTTCGCCAAGTGTTACTGCAGAACAACAATATCTCAGGTCGAATTCCGCCCGAGCTTGGAACCCTTCCAAAGCTTCAGACATTGGATCTTTCCAATAATCGATTCTCTGGGGTGATTCCTTCCTCTCTCGGCCAATTGGATAGTCTCCAATACCTGAGGCTCAACAACAATAGCTTGTCAGGACCCTTTCCTGTTTCACTGGCCAAAATCCCACAGCTTGCTTTCTTAGACTTGTCTTATAACAATCTAAGTGGACCATTGCCCAAGTTTCCTGCAAGGGCATTCAATATTGTGGGAAACCCATTAATTTGTGGAAGCATCACTACTGAAGGTTGCTCTGGATCAGCAACTCTTATGCCCGTTTCCTTCTCTCAAACATCATCACAAGGAAAACACAAGTCCAGAAAAATAGCAGTTGCACTTGGAGTTAGTCTTAGTTGTGCTTCTCTCATGGTTTTGCTCTTTGGGATCTTTTGGTATAGACATAAACGACAGCACCAGGCCATCCTATTTATTGGTGAATATAAGGAAGAGGGAATTGTCAGCTTGGGAAATCTCAAGACTTTCACGTTCAGAGAGCTCCAACAAGCAACAGATAGTTTCAGCTCCAAGAACATACTTGGGGCTGGAGGTTTTGGCAATGTTTATAGGGGAAAACTTGGTGACGGCTCTATGGTGGCAGTGAAAAGACTGAAGGATGTTACTGGAAGTTCTGGTGAATCACAGTTTCGAACAGAATTGGAGATGATCAGTTTGGCAGTTCATCGCAATTTACTTCGCTTAATTGGATATTGTGCTACTCCTAATGAAAAGCTTCTGGTTTATCCTTATATGTCTAATGGCAGTGTGGCATCCAGGCTTAGAGGCAAACCATCTTTAGATTGGAACACAAGAAAGAGGATAGCAATTGGAGCTGCGAGAGGACTTCTGTATCTGCACGAGCAATGCGATCCAAAGATAATACACAGAGATGTTAAAGCTGCTAATGTTCTTCTTGATGACTACTGTGAGGCTGTTGTTGGTGATTTTGGCCTTGCAAAGCTCCTTGACCATTCTGAATCCCACGTCACAACCGCGGTCCGTGGCACTGTTGGGCACATTGCTCCAGAGTACCTTTCCACTGGCCAATCTTCTGAGAAAACTGATGTATTTGGTTTTGGCATTCTCTTGCTAGAGCTCATAACTGGAATGACAGCACTTGAGTTTGGGAAAACTGTGAATCAAAAAGGCGCTATGCTAGAGTGGGTTAGGAAAATACAGCAAGAAAAGAAGGTTTCGGTGTTGGTGGACAAGGAGCTAGGGAGCAACTATGACATGATAGAGGTGGGGGAGATGCTTCAAGTGGCTTTACTATGCACTCAATATTTGCCAGCACATCGCCCCAAGATGTCCGAGGTGGTCCGAATGCTTGAAGGCGATGGACTTGCTGAGAAGTGGGCAGCATCACATAGTAATAATCATGATCGGAATGTTAGTCATGGCATGACCCCAAGCAATAACAGTGGCCACACATCATCCCGCGCCCCTGCCCCTGCATCGAAGCATGATGACAGTGTTCATGATCGTACAAGCATGTTTGGCACCACAATGGATGACGATGATGATGAACGCTCCTTGGATTCCTATGCCATGGAACTCTCTGGTCCTAGGTAA 1974 0.461 MLVLVSYVEIRCCSIVMAVVLLLVLFLSRAALSSSAEPRNHEVEALMSIKWSLTDPHGVLSNWDEYSVDACSWAMITCSSDSLVIGLGAPSQSLSGTLSAAIGNLTNLRQVLLQNNNISGRIPPELGTLPKLQTLDLSNNRFSGVIPSSLGQLDSLQYLRLNNNSLSGPFPVSLAKIPQLAFLDLSYNNLSGPLPKFPARAFNIVGNPLICGSITTEGCSGSATLMPVSFSQTSSQGKHKSRKIAVALGVSLSCASLMVLLFGIFWYRHKRQHQAILFIGEYKEEGIVSLGNLKTFTFRELQQATDSFSSKNILGAGGFGNVYRGKLGDGSMVAVKRLKDVTGSSGESQFRTELEMISLAVHRNLLRLIGYCATPNEKLLVYPYMSNGSVASRLRGKPSLDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDYCEAVVGDFGLAKLLDHSESHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMTALEFGKTVNQKGAMLEWVRKIQQEKKVSVLVDKELGSNYDMIEVGEMLQVALLCTQYLPAHRPKMSEVVRMLEGDGLAEKWAASHSNNHDRNVSHGMTPSNNSGHTSSRAPAPASKHDDSVHDRTSMFGTTMDDDDDERSLDSYAMELSGPR 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g02953 657 SMART LRR_typ_2 129 152 IPR003591 -
Arst1g02953 657 SMART LRR_typ_2 153 184 IPR003591 -
Arst1g02953 657 SMART LRR_typ_2 105 127 IPR003591 -
Arst1g02953 657 Gene3D Phosphorylase Kinase; domain 1 279 384 - -
Arst1g02953 657 Pfam Protein kinase domain 309 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g02953 657 FunFam Somatic embryogenesis receptor kinase 1 278 384 - -
Arst1g02953 657 MobiDBLite consensus disorder prediction 591 657 - -
Arst1g02953 657 ProSitePatterns Serine/Threonine protein kinases active-site signature. 427 439 IPR008271 GO:0004672|GO:0006468
Arst1g02953 657 MobiDBLite consensus disorder prediction 620 639 - -
Arst1g02953 657 ProSiteProfiles Protein kinase domain profile. 308 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g02953 657 Gene3D Ribonuclease Inhibitor 39 221 IPR032675 -
Arst1g02953 657 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 17 588 - -
Arst1g02953 657 MobiDBLite consensus disorder prediction 592 615 - -
Arst1g02953 657 Gene3D Transferase(Phosphotransferase) domain 1 385 596 - -
Arst1g02953 657 PRINTS Leucine-rich repeat signature 177 190 - -
Arst1g02953 657 PRINTS Leucine-rich repeat signature 132 145 - -
Arst1g02953 657 Pfam Leucine rich repeat N-terminal domain 40 79 IPR013210 -
Arst1g02953 657 FunFam Somatic embryogenesis receptor-like kinase 1 385 597 - -
Arst1g02953 657 SUPERFAMILY Protein kinase-like (PK-like) 290 578 IPR011009 -
Arst1g02953 657 SUPERFAMILY L domain-like 39 204 - -
Arst1g02953 657 SMART serkin_6 308 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g02953 657 ProSitePatterns Protein kinases ATP-binding region signature. 314 336 IPR017441 GO:0005524
Arst1g02953 657 Pfam Leucine rich repeat 130 190 IPR001611 GO:0005515
Arst1g02953 657 FunFam Putative LRR receptor-like serine/threonine-protein kinase 39 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g02953 Arst-Chr1 91301361 91306442 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g02953 40 657 Receptor kinase-like Gene Family AT5G16000 64.809 0.0 788
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Arst1g02953 Pkinase 1.8e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g02953 - - gmx:100775565 1053.12