Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g02908 ATGGGATCCTCCCTGAGTTGCTGTGGCTCTGACAAAATTGAAGAAGCAGCGCAAACAGCATTTGGTGCAGTTAACAACAATTCATGGAGAATATTCACGTACAAGGAGCTGCATGCAGCTACGAATGGATTCAGTGAGGACAATAAGCTTGGTGAAGGTGGATTTGGAAGCGTGTATTGGGGAAAAACAAGTGATGGTCATGAGTGTTGGCAGATAGCGGTGAAGAAACTGAAGGCAATGAACTCGAAGGCAGAGATGGAATTTGCGGTAGAAGTAGAAGTACTGGGAAGGGTTAGGCACAAGAATTTGTTGGGACTGAGAGGGTACTGTGCAGGGAATGAAGAAAGGCTTATAGTGTACGATTACATGGCGAATCTAAGCCTTCTTTCTCATCTGCATGGGCAGTTTGCAAATGAAGTGCAACTGGATTGGAAAAGGAGAATGAAGATTGCAATTGGATCTGCAGAAGGAGTGTTGTATTTGCACCATGACGTCACACCACACATCATCCACAGAGACATCAAAGCAAGCAACGTTCTTCTCAACTCAGACTTCGAGCCGCTTGTTGCTGACTTCGGCTTCGCTAAGCTGATCCCTGAAGGGGTTAGCCACATGACTACCCGTGTTAAGGGCACTTTGGGATACTTGGCACCCGAATACGCCATGTGGGGAAAAGTCTCCGAGAGTTGCGATGTTTATAGCTTTGGGATTCTTCTCTTGGAGCTTGTAACTGGAAGAAAGCCAATTGAGAAGCTCCCTGGTGGGATTAAGAGAACCATAACCGAATGGGCTGAGCCATTCATAAGTAAATCAAGGTTCGGGGATCTTGTTGATCCTAAACTCAGAGGTAACTTTGATGAGAATCAGGTGAAGCAAGCCATTCATGTGGCTGCACTTTGCGTGCAGAGTGAGCCTGATAAGAGACCCAACATGAAGCAAGTGGTTAACCTTCTCAAAGGGTATGAACCCAATCATAACACTGTTTTCAACACTAGGCTTCACACTGTCAAATACACTGATACATTGATGCCACTTGATCATCATGGTGATGATGATCTTGATGATGATGCAACTAATAGCAGCGCCGGCTATGGTGTTTTTAGTGCCATTCAGGTCCAAAAGATGAACTTACCACCATAA 1140 0.4526 MGSSLSCCGSDKIEEAAQTAFGAVNNNSWRIFTYKELHAATNGFSEDNKLGEGGFGSVYWGKTSDGHECWQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGNEERLIVYDYMANLSLLSHLHGQFANEVQLDWKRRMKIAIGSAEGVLYLHHDVTPHIIHRDIKASNVLLNSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLELVTGRKPIEKLPGGIKRTITEWAEPFISKSRFGDLVDPKLRGNFDENQVKQAIHVAALCVQSEPDKRPNMKQVVNLLKGYEPNHNTVFNTRLHTVKYTDTLMPLDHHGDDDLDDDATNSSAGYGVFSAIQVQKMNLPP 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g02908 379 Gene3D Phosphorylase Kinase; domain 1 14 122 - -
Arst1g02908 379 PANTHER OS01G0253100 PROTEIN 25 322 - -
Arst1g02908 379 ProSitePatterns Protein kinases ATP-binding region signature. 50 76 IPR017441 GO:0005524
Arst1g02908 379 SUPERFAMILY Protein kinase-like (PK-like) 28 329 IPR011009 -
Arst1g02908 379 FunFam PTI1-like tyrosine-protein kinase At3g15890 123 333 - -
Arst1g02908 379 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
Arst1g02908 379 SMART serkin_6 44 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g02908 379 Gene3D Transferase(Phosphotransferase) domain 1 123 340 - -
Arst1g02908 379 CDD STKc_IRAK 50 320 - -
Arst1g02908 379 Pfam Protein tyrosine and serine/threonine kinase 47 318 IPR001245 GO:0004672|GO:0006468
Arst1g02908 379 ProSiteProfiles Protein kinase domain profile. 44 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g02908 379 FunFam PTI1-like tyrosine-protein kinase At3g15890 16 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g02908 Arst-Chr1 90835151 90836917 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g02908 6 337 Trihelix Transcription Factor Family AT5G38560 44.540 7.65e-93 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Arst1g02908 PK_Tyr_Ser-Thr 2.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g02908 - - ahf:112698754 736.487