Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g02907 ATGGGATCCTCCCTGAGTTGCTGTGGCTCTGACAAAATTGAAGAAGCAGCGCAAACAGCATTTGGTGCAGTTAACAACAATTCATGGAGAATATTCACGTACAAGGAGCTGCATGCAGCTACGAATGGATTCAGTGAGGACAATAAGCTTGGTGAAGGTGGATTTGGAAGCGTGTATTGGGGAAAAACAAGTGATGGTCATGAGATAGCGGTGAAGAAACTGAAGGCAATGAACTCGAAGGCAGAGATGGAATTTGCGGTAGAAGTAGAAGTACTGGGAAGGGTTAGGCACAAGAATTTGTTGGGACTGAGAGGGTACTGTGCAGGGAATGAAGAAAGGCTTATAGTGTACGATTACATGGCGAATCTAAGCCTTCTTTCTCATCTGCATGGGCAGTTTGCAAATGAAGTGCAACTGGATTGGAAAAGGAGAATGAAGATTGCAATTGGATCTGCAGAAGGAGTGTTGTATTTGCACCATGACGTCACACCACACATCATCCACAGAGACATCAAAGCAAGCAACGTTCTTCTCAACTCAGACTTCGAGCCGCTTGTTGCTGACTTCGGCTTCGCTAAGCTGATCCCTGAAGGGGTTAGCCACATGACTACCCGTGTTAAGGGCACTTTGGGATACTTGGCACCCGAATACGCCATGTGGGGAAAAGTCTCCGAGAGTTGCGATGTTTATAGCTTTGGGATTCTTCTCTTGGAGCTTGTAACTGGAAGAAAGCCAATTGAGAAGCTCCCTGGTGGGATTAAGAGAACCATAACCGAATGGGCTGAGCCATTCATAAGTAAATCAAGGTTCGGGGATCTTGTTGATCCTAAACTCAGAGGTAACTTTGATGAGAATCAGGTGAAGCAAGCCATTCATGTGGCTGCACTTTGCGTGCAGAGTGAGCCTGATAAGAGACCCAACATGAAGCAAGTGGTTAACCTTCTCAAAGGGTATGAACCCAATCATAACACTGTTTTCAACACTAGGCTTCACACTGTCAAATACACTGATACATTGATGCCACTTGATCATCATGGTGATGATGATCTTGATGATGATGCAACTAATAGCAGCGCCGGCTATGGTGTTTTTAGTGCCATTCAGGTCCAAAAGATGAACTTACCACCATAA 1131 0.4518 MGSSLSCCGSDKIEEAAQTAFGAVNNNSWRIFTYKELHAATNGFSEDNKLGEGGFGSVYWGKTSDGHEIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGNEERLIVYDYMANLSLLSHLHGQFANEVQLDWKRRMKIAIGSAEGVLYLHHDVTPHIIHRDIKASNVLLNSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLELVTGRKPIEKLPGGIKRTITEWAEPFISKSRFGDLVDPKLRGNFDENQVKQAIHVAALCVQSEPDKRPNMKQVVNLLKGYEPNHNTVFNTRLHTVKYTDTLMPLDHHGDDDLDDDATNSSAGYGVFSAIQVQKMNLPP 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g02907 376 Pfam Protein kinase domain 45 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g02907 376 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Arst1g02907 376 PANTHER OS01G0253100 PROTEIN 25 319 - -
Arst1g02907 376 Gene3D Transferase(Phosphotransferase) domain 1 120 337 - -
Arst1g02907 376 CDD STKc_IRAK 50 317 - -
Arst1g02907 376 SMART serkin_6 44 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g02907 376 ProSitePatterns Protein kinases ATP-binding region signature. 50 73 IPR017441 GO:0005524
Arst1g02907 376 ProSiteProfiles Protein kinase domain profile. 44 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g02907 376 Gene3D Phosphorylase Kinase; domain 1 14 119 - -
Arst1g02907 376 SUPERFAMILY Protein kinase-like (PK-like) 28 326 IPR011009 -
Arst1g02907 376 FunFam PTI1-like tyrosine-protein kinase At3g15890 120 330 - -
Arst1g02907 376 FunFam PTI1-like tyrosine-protein kinase At3g15890 16 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g02907 Arst-Chr1 90835151 90836917 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g02907 6 334 Trihelix Transcription Factor Family AT5G38560 44.928 6.13e-95 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Arst1g02907 Pkinase 1.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g02907 - - ahf:112698754 741.88