Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g02906 ATGGTGCTTGCTTACCCTTCTAAGGTGCTAGTTGGACTCTCTTTGGACTCAGATGACAGCAAGGAGCTTCTCTCATGGGCAATAAGAGTCCTTGCCAATCCAAATGACAGCATTGTGGCAGTGCATGTTCTTGTTACTGAGGATAAGAAGAAGCGCGCCTCGGTCAGAAAGAGGCAATCACAACTTCGGCAGGCAAAGGCTCATGTTATATCTATGCTTGGAGAATTTGCACAAACATGTTGGTCTAAGCAGGTTAATCTGGAGGCAAGAGTGGCATTCAGTTCCACAGTAGGTGGAGGTTTAGCTGAGGAAGCCAAGTCCATCAATGCCGATTTTCTTCTTCTACGTGGCTCAAGAAATCCAAAAAACAAGAATGGAAGTTCCAAGGGAATTAGCAAGTATTGCTTTGAGCATGCACATGAAGGCTGCACTGTGGTCTCGGTTGGGAAATTCGCCAAGGCAGAGCAAGGCTCCAGTTCAAATCCGAAGCATTCTCAAGATGATAGTGAAGCAAGTTCTAAATGGTTATCTAAGGATGATGATAATCAAGGTGACAAGGCTGCTACCTTCCCTGTTCTGAATGAATTCATGTCTGACTCTGAGTCTAAAGAACAGAACAGTTCACCAAGAACAGTACTAGATGCGCTGGAAGGGCAATCTAACAGCACAGAAGATGATACATTCAGCACTATGGTCTCAAGCACCTGCACCACAGATACACCTAAGAGAAGATCAAAGCCTCAATCTCCCTTGAGGCGCATAGCCTCCTTCCTCGGATCACCATTCCGAAGAAAACATAGCATGTCCAAGAATGAAAAGGCTCAACCCTTGTTGAAGTGCTTCAGCTATGAGCAGATAGCCAATGCTACTAATGAATTCCACCAAGATAATTTGGTCGGGAGAGGCGGATACTCGGAAGTATACAAAGGTGATCTTTGTGATGGAAGAAGCATTGCTGTGAAGAGATTGGCGAAGGACAACAATGATCTTAACAAGGAGAAAGAGTTCCTTATGGAATTGGGAGTTATTGGACATGTCTGCCATCCTAACACTGCATCCTTAGTTGGATGCTGCGTCGAAAATGGACTCTATCTAGTCTTCAATTACTCTCAGAATGGAAACTTGGCAACTGCACTGCACGGTAAAGGTGGAGATTCACTTGATTGGCCAATCAGATACAAGATTGCTATTGGAGTTGCAAGGGGGCTCCATTACCTTCATAAATGTTGCAAACACAGGATAATTCATCGCGATATCAAAGCTTCCAATGTTCTTCTAGGCCCTGATTATGAGCCAGAGATAACAGATTTTGGGCTTGCAAAGTGGCTTCCAAACAAGTGGAGTCATCATGCAGTGATCCCAGTAGAAGGGACATTCGGATACTTAGCACCAGAGTACTTCATGCATGGAATAGTGGATGAGAAAACAGATGTTTTTGCATTTGGTGTTCTTCTTCTTGAGATTGTAACTGGACGCAGACCTGTTGATTCATCAAGCCAAAACCTTCTCCTTTGGGCAAAGCCTCTGATGGAATCAGGGAATATTGGAGAGCTAGCTGATCCAAAAATGGATGGTAAATATGATGAAGAGCAACTCTATAGGTTGGTGCTTACAGCTTCATACTGTGTCAGACAAAATGCCACGTGGCGCCCTCCAATGAGCGAGGTGTTAGAGTTGCTGGCAAGTGGGAATGACTGTGAGGCAGGGAAAAGTTGGAGGATCCCAAAATTCACTTCAGATGAATTGGATGATTATTCCATGGTGTTTGGATATGATGTCCCCTCACACATATCTCTCGAGGATTTTCTCTGA 1812 0.4437 MVLAYPSKVLVGLSLDSDDSKELLSWAIRVLANPNDSIVAVHVLVTEDKKKRASVRKRQSQLRQAKAHVISMLGEFAQTCWSKQVNLEARVAFSSTVGGGLAEEAKSINADFLLLRGSRNPKNKNGSSKGISKYCFEHAHEGCTVVSVGKFAKAEQGSSSNPKHSQDDSEASSKWLSKDDDNQGDKAATFPVLNEFMSDSESKEQNSSPRTVLDALEGQSNSTEDDTFSTMVSSTCTTDTPKRRSKPQSPLRRIASFLGSPFRRKHSMSKNEKAQPLLKCFSYEQIANATNEFHQDNLVGRGGYSEVYKGDLCDGRSIAVKRLAKDNNDLNKEKEFLMELGVIGHVCHPNTASLVGCCVENGLYLVFNYSQNGNLATALHGKGGDSLDWPIRYKIAIGVARGLHYLHKCCKHRIIHRDIKASNVLLGPDYEPEITDFGLAKWLPNKWSHHAVIPVEGTFGYLAPEYFMHGIVDEKTDVFAFGVLLLEIVTGRRPVDSSSQNLLLWAKPLMESGNIGELADPKMDGKYDEEQLYRLVLTASYCVRQNATWRPPMSEVLELLASGNDCEAGKSWRIPKFTSDELDDYSMVFGYDVPSHISLEDFL 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g02906 603 Gene3D Transferase(Phosphotransferase) domain 1 371 572 - -
Arst1g02906 603 Pfam Universal stress protein family 8 146 IPR006016 -
Arst1g02906 603 Gene3D Phosphorylase Kinase; domain 1 256 369 - -
Arst1g02906 603 Coils Coil 320 340 - -
Arst1g02906 603 CDD USP_Like 8 148 - -
Arst1g02906 603 SMART serkin_6 293 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g02906 603 MobiDBLite consensus disorder prediction 167 185 - -
Arst1g02906 603 MobiDBLite consensus disorder prediction 217 244 - -
Arst1g02906 603 FunFam Probable receptor-like serine/threonine-protein kinase At5g57670 370 574 - -
Arst1g02906 603 ProSiteProfiles Protein kinase domain profile. 293 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst1g02906 603 SUPERFAMILY Protein kinase-like (PK-like) 267 560 IPR011009 -
Arst1g02906 603 FunFam Putative receptor-like serine/threonine-protein kinase 262 369 - -
Arst1g02906 603 Pfam Protein tyrosine and serine/threonine kinase 295 559 IPR001245 GO:0004672|GO:0006468
Arst1g02906 603 ProSitePatterns Serine/Threonine protein kinases active-site signature. 414 426 IPR008271 GO:0004672|GO:0006468
Arst1g02906 603 PANTHER OS08G0249100 PROTEIN 57 573 IPR046958 -
Arst1g02906 603 ProSitePatterns Protein kinases ATP-binding region signature. 299 321 IPR017441 GO:0005524
Arst1g02906 603 MobiDBLite consensus disorder prediction 154 186 - -
Arst1g02906 603 Gene3D HUPs 4 148 IPR014729 -
Arst1g02906 603 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 7 140 - -
Arst1g02906 603 MobiDBLite consensus disorder prediction 217 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g02906 Arst-Chr1 90830443 90833752 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g02906 226 556 Trihelix Transcription Factor Family AT1G68690 41.765 9.86e-74 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Arst1g02906 PK_Tyr_Ser-Thr 1.8e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g02906 - - gmx:100782832 971.459