Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g02904 ATGGGCCTTAAGGGGTTGAGGAGCGGCTGGACCGTGCCGCCCAAGCCATGTGACTCCTGCAAGATCGCTTCCGCGGCACTCTTCTGCCGCCCTGATTCCGCCTTCCTCTGCATAGCCTGCGATTCCAAGATTCACTGCGCCAACAAGCTTGCTTCGCGCCACGACCGAGTCTGGATGTGTGAGGTCTGCGAGCAGGCACCTGCTGCGGTCACCTGCAAAGCTGACGCAGCAGCCCTCTGCGTCACCTGCGACTCTGACATCCACTCTGCTAACCCCCTCGCCCGCCGCCACGAGCGCATTCCCGTCGAGCCTTTCTTTGACTCTGCCGACTCCATCGTCAAGGCCTCTGCCGCCTCCTTTAGCTTCGTCGTCCCAACCGACAACGGCATCTCCTCTGACGGATTCCCCAACGACGACGCCGCCTGGCTCATTCCCAACCCAAACTACGGCTCAAAGCTTATGGACGCCCCGGACATGAAATCAAGGGAGATGTTCTTCTCAGAAATGGACCCCTTCCTCGATTTCGATTATTCCAACTCCTTCCAGAACAACAACAACAACAACAACAACAGCGCCGGAAACGACAGCGTCGTTCCGGTTCAATCCAAACCCGCTCCCATGATGAATCACCATGCCGAAGGTAGCTGCTTCGACATCGATTTTTGTAGATCGAAGCTTTCCTCCTTCAACTATCCATCACAGTCTATTAGCCAAAGCGTTTCTTCGTCTTCGCTTGATGTAGGAGTGGTGCCAGACGGGAACACCGTCTCGGATATATCGTACTCGTTCGGCCGGAACTGCTCCGATTCGAGTGGGATGGGATCGGCGGGAAGTGGCGGCGGAGGTACGCAGCTGTGCGGGATGGACCGTGAGGCGAGGGTGCTGAGGTACAGGGAGAAGAGGAAGAACCGTAAGTTCGAGAAGACCATAAGATACGCTTCGCGTAAGGCTTATGCAGAAACCCGGCCCAGGATCAAGGGCCGGTTCGCTAAACGGACCGAAATCGAGTCGGAGGTGGATCGTCTCTACAGCCCCGGCGGTGGTGTCCCAGGGTGTCTCATGCTGGACAACCAATACGGCGTCGTACCATCGTTTTAG 1098 0.5701 MGLKGLRSGWTVPPKPCDSCKIASAALFCRPDSAFLCIACDSKIHCANKLASRHDRVWMCEVCEQAPAAVTCKADAAALCVTCDSDIHSANPLARRHERIPVEPFFDSADSIVKASAASFSFVVPTDNGISSDGFPNDDAAWLIPNPNYGSKLMDAPDMKSREMFFSEMDPFLDFDYSNSFQNNNNNNNNSAGNDSVVPVQSKPAPMMNHHAEGSCFDIDFCRSKLSSFNYPSQSISQSVSSSSLDVGVVPDGNTVSDISYSFGRNCSDSSGMGSAGSGGGGTQLCGMDREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTEIESEVDRLYSPGGGVPGCLMLDNQYGVVPSF 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g02904 365 SMART bboxneu5 12 59 IPR000315 GO:0008270
Arst1g02904 365 SMART bboxneu5 60 102 IPR000315 GO:0008270
Arst1g02904 365 Pfam B-box zinc finger 57 102 IPR000315 GO:0008270
Arst1g02904 365 ProSiteProfiles Zinc finger B-box type profile. 12 59 IPR000315 GO:0008270
Arst1g02904 365 ProSiteProfiles CCT domain profile. 290 332 IPR010402 GO:0005515
Arst1g02904 365 CDD Bbox1_BBX-like 60 102 - -
Arst1g02904 365 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 16 348 IPR045281 GO:0009909
Arst1g02904 365 ProSiteProfiles Zinc finger B-box type profile. 55 102 IPR000315 GO:0008270
Arst1g02904 365 CDD Bbox1_BBX-like 16 59 - -
Arst1g02904 365 Pfam CCT motif 290 332 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g02904 Arst-Chr1 90815282 90817045 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g02904 3 365 C2C2-CO-like Transcription Factor Family AT5G57660 54.111 1.80e-121 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Arst1g02904 zf-B_box 1e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g02904 - - gmx:100805693 572.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g02904 1 90815282 90817045 Arst1g02904 1 90815282 90817045 ECH